DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1695 and tbc-12

DIOPT Version :9

Sequence 1:NP_728346.2 Gene:CG1695 / 33046 FlyBaseID:FBgn0031116 Length:1192 Species:Drosophila melanogaster
Sequence 2:NP_508458.1 Gene:tbc-12 / 180556 WormBaseID:WBGene00044061 Length:614 Species:Caenorhabditis elegans


Alignment Length:624 Identity:127/624 - (20%)
Similarity:213/624 - (34%) Gaps:173/624 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   646 STPEERK-KQDETCKHYYETTMSEWLAVEAIVRQREKEKTALAVAK-----LSAEQARLAANATS 704
            ||.:|.| ::....:..||:...:......|.........|.:.||     |.:......|:.:|
 Worm    63 STAQETKFRRGHIRRSSYESAQIQLNFARRITTANGTPALAPSAAKCLDEPLCSLSLNTRADCSS 127

  Fly   705 SSNPHQKLANGSQQLQLEHGNG--EEDQENLVLDEGENDVFDDNDFSDISDPGDLFDEPELGQEA 767
            ||         |:|.|.:.|.|  |.|.:...||..          |::||    ||||....|.
 Worm   128 SS---------SEQDQYDSGIGCTESDSKRSSLDRR----------SELSD----FDEPPSKPET 169

  Fly   768 EEQEQ-SNLEEEVFEKQEDEEDQEDHDQREMPRLSEKLVLEFQNIDNMEPLRLQENCFADSETEN 831
            ..:.: .|..:..|.:.::|:    |..:                           .|.....::
 Worm   170 LSKSRFFNFPKNFFSRNKEEK----HGWK---------------------------MFGSRNKQS 203

  Fly   832 DLGLGLDSSGNILMLSIKSSPSTSSYETVGNE--FLDMAE-AKLEEEEPPGQLSKFHSADDVRLD 893
            .:   :.::|.||.......||.|:.|...::  :||:.| ||.:|:.          |:..||.
 Worm   204 GV---MATTGLILEERPSGLPSKSADEAAHHKQMYLDILEQAKKKEQR----------AEKERLQ 255

  Fly   894 NQDEEESSQPATAV--------IITEAASLDALDDDPTEEF-------TSRKTSLMSPLNEDITV 943
            .:.|::..:..||.        |:.:...:.  |.....|.       ..|.......:...|.:
 Worm   256 AKAEQKRLEEQTAAHCRVWVEQILPKWEEMK--DSKRCRELWWQGVPAKVRGELWFLTIGNQIEI 318

  Fly   944 VASL-DALQEPKSACVSPASSNGGVYSVELLEQFGLNLHRIEKDVQRCDRNYWYFANEN--LDKL 1005
            ...| |.|.:.....::...:.....|.|..|   .::.:|..|..|...:...|..:.  .|.|
 Worm   319 TKELYDGLMDQAEEKIAKQLAEQNKNSAERKE---TSVTQIHLDATRTFTSLGMFQKDGPYYDHL 380

  Fly  1006 RNVISTYVWEHLDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMERMIENFPSG---GAMDMHF 1067
            ..::|.|.....|:||:|.|..:.|.||:..|... ::..|..|::|.:::...|   ..|..:|
 Worm   381 LKLLSAYAILRPDIGYVQSMTFIAAVLLIQMDPYP-AFISFANLLDRSLQSAFFGLKQPQMTEYF 444

  Fly  1068 -ANMRSLIQILDS--EMYDLMDSNGDYTHFYFCYRWFLLDFKRELVYDDVFATWEVIWAAKHIAS 1129
             |..|.|.|.|.:  :..|.:|...|    .:...|....:.:.|..|.....|:|     :...
 Worm   445 IAYDRYLEQELPALHQHLDKLDVRPD----LYLIEWTFAMYAKSLPLDVTCRIWDV-----YFRD 500

  Fly  1130 GHFVLF-LALALLETYRDIILSNSMDFTDVIKF-------------------------------- 1161
            |...|| .||.:|..|...:|  :|||.|.::|                                
 Worm   501 GEEFLFKAALGILRMYEPKLL--TMDFDDCVEFLTKLPNTLTGAELFRNIEPFMRPYNGESSRSK 563

  Fly  1162 ------FNEMAER-------------HNAQSILQLSRSL 1181
                  |.|:.||             ||.|. |::|:||
 Worm   564 KRFSQIFQEIDERVNPGGTTARTQITHNVQE-LKMSKSL 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1695NP_728346.2 RUN 63..237 CDD:280855
PH_RUTBC 310..485 CDD:275431
SRP68-RBD <648..>713 CDD:304552 13/70 (19%)
TBC 947..1124 CDD:214540 42/185 (23%)
tbc-12NP_508458.1 TBC 295..521 CDD:214540 51/238 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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