DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11710 and Trip4

DIOPT Version :9

Sequence 1:NP_001285492.1 Gene:CG11710 / 33044 FlyBaseID:FBgn0031115 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_001344801.1 Gene:Trip4 / 56404 MGIID:1928469 Length:581 Species:Mus musculus


Alignment Length:584 Identity:196/584 - (33%)
Similarity:301/584 - (51%) Gaps:112/584 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LSKCLDCVITDQMLAAILNIKDDYEFDNYFGNLLSEDNEEHRMFLVN------------------ 55
            |.|.....::::::..:|:|::..|...|..:||..:..:...|:.:                  
Mouse    20 LQKTFALDVSEEIIQYVLSIENAEEIREYVTDLLQGNEGKKGQFIEDLITKWQKNDQEFISDSFQ 84

  Fly    56 -CRRM--LLSG-------KQPRNNGK-------YLSPPLA---PTSPNCPKQNISKGAKGKSGKH 100
             |.|.  :|.|       |:.|..|:       :..|.:|   .|..:..|...|..:..|..:.
Mouse    85 QCLRKDEILDGQRSVDQLKRSRRKGRNKQEVPAFPEPDVAVEVKTPLDLAKAQESNNSVKKKTRF 149

  Fly   101 VNLYASDGRVQGD--TIILKGRRHCDCQAGQHKLINNCLGCGRIVCEQEGSGPCLSCGDPVRTPE 163
            ||||..:|:   |  .::|.||..|||...:||||||||.|||||||||||||||.||..|.|.|
Mouse   150 VNLYTREGQ---DKLAVLLPGRHPCDCLGQKHKLINNCLVCGRIVCEQEGSGPCLFCGSLVCTNE 211

  Fly   164 EEQQLAKAARE-----KGGTKSAAKQGK--KSTKEL-------STQALDKALAQRDRLLEYDKNS 214
            |:..|.:.:.:     |.....|...||  .|||:|       ....|:||:..:::|||:|:.|
Mouse   212 EQDILQRDSNKSQKLLKKLMSGAETSGKVDVSTKDLLPHQESRMKSGLEKAIKHKEKLLEFDRTS 276

  Fly   215 EKRTTVIDDELDYF-QENSVWLSDAEREKFEKLHREMEEVKHGSRMKRKIRVDFAGRELPEEPTI 278
            .:||.|||||.||| .:::.|||..|||..:|...|:.|::|.||:.:|:.:|||||::.|:...
Mouse   277 IRRTQVIDDESDYFASDSNQWLSKVEREMLQKREEELRELRHASRLSKKVTIDFAGRKILEDENP 341

  Fly   279 SKEYEQQVISELAAVSKASGVGSNWSASSVTGHSALTL-----APHLNMTKPPVYKPSKESKSWP 338
            ..||..::...:.|:           ||.....|.:||     .|...:..|.:|:.|.:     
Mouse   342 LAEYHSRLDETIQAI-----------ASGTLNQSLVTLDRSCEEPLGVLVNPNMYQASPQ----- 390

  Fly   339 APAAGSDWLERTYN-----------------------RVQDKELLEMQDMRQCLSMHQPWASLLV 380
                   |::.|.:                       |:||:|..|..|...|||||||||||||
Mouse   391 -------WVDNTGSTPQKKTSLSAGPRLEPSLHQHQLRIQDQEFQEGFDGGWCLSMHQPWASLLV 448

  Fly   381 AGIKKHEGRVWYSEHRGRLWIASTSKEPHAEDIAQMEGFYKVLYGDPDIKFPSHYPTSSLLGCVH 445
            .|||:.|||.||:.||||||||:|.|.|..:::::::..|::|.| .|::||:.||:..|||||.
Mouse   449 RGIKRVEGRSWYTPHRGRLWIAATGKRPSPQEVSELQATYRLLRG-KDVEFPNDYPSGCLLGCVD 512

  Fly   446 VDSCLPQEEYRELYP--NGESESPYVFVCTKPEQLNILLPVHGDHKIYELPLKTHTAACKTLLR 507
            :..||.|::::|.:|  :.||:|.:||:|..|:::.:..|:.|:.||::|..|.|..|.|.|::
Mouse   513 LIDCLSQKQFQEQFPDISQESDSSFVFICKNPQEMVVKFPIKGNPKIWKLDSKIHQGAKKGLMK 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11710NP_001285492.1 zf-C2HC5 120..168 CDD:283802 33/47 (70%)
ASCH_ASC-1_like 367..478 CDD:119346 57/112 (51%)
Trip4NP_001344801.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..121 3/20 (15%)
zf-C2HC5 168..216 CDD:368799 33/47 (70%)
Mediates interaction with DDRGK1. /evidence=ECO:0000250|UniProtKB:Q15650 200..300 37/99 (37%)
Mediates interaction with UFL1. /evidence=ECO:0000250|UniProtKB:Q15650 300..400 30/122 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 390..410 2/31 (6%)
ASCH_ASC-1_like 434..547 CDD:119346 57/113 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842769
Domainoid 1 1.000 115 1.000 Domainoid score I6028
eggNOG 1 0.900 - - E1_KOG2845
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9426
Inparanoid 1 1.050 308 1.000 Inparanoid score I2593
Isobase 1 0.950 - 0 Normalized mean entropy S5861
OMA 1 1.010 - - QHG56537
OrthoDB 1 1.010 - - D1132270at2759
OrthoFinder 1 1.000 - - FOG0004371
OrthoInspector 1 1.000 - - oto91937
orthoMCL 1 0.900 - - OOG6_103387
Panther 1 1.100 - - LDO PTHR12963
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1813
SonicParanoid 1 1.000 - - X3093
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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