DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11710 and trip-4

DIOPT Version :9

Sequence 1:NP_001285492.1 Gene:CG11710 / 33044 FlyBaseID:FBgn0031115 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_497100.1 Gene:trip-4 / 175159 WormBaseID:WBGene00000208 Length:425 Species:Caenorhabditis elegans


Alignment Length:438 Identity:121/438 - (27%)
Similarity:193/438 - (44%) Gaps:66/438 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 GAKGKSGKHVNLYASDGRVQGDTIILKGRRHCDCQAGQHKLINNCLGCGRIVCEQEGSGPCLSCG 156
            |.||......|:.|:...:.....:.|||..|.|||..||||.||||||||||||||||||.:||
 Worm     7 GGKGGVAGRQNVLAAKTEISFADTLRKGRHECLCQARTHKLILNCLGCGRIVCEQEGSGPCFTCG 71

  Fly   157 DPVRTPEEEQQLAKAAREKGGTKS----AAKQGK----KSTKELSTQALDKALAQRDRLLEYDKN 213
            ..|.|.||.:.|     .:|..||    |...|.    .|.|::|: :...|...|::|||.|.:
 Worm    72 TLVCTREEREIL-----NRGTNKSRDLLARLTGDGSDIGSLKQISS-SYQNATEFRNKLLEADAD 130

  Fly   214 SEKRTTVIDDELDYFQ-ENSVWLSDAEREKFEKLHREMEEVKHGSRMKRKIRVDFAGRELPE--- 274
            :|:||.|.|.:.||.. |||.:||.::||..:....|::.::...|.|..:.:||.|..:.|   
 Worm   131 TERRTKVNDLQSDYSTIENSPFLSASDREALKLRREELKALREKERKKFVVSLDFDGGVVHEMTR 195

  Fly   275 -----------EPTISKEYEQQVISELAAVSKA---SGVGSNWSASSVTGHSALTLAPHLNMTKP 325
                       :|.|.:..|:  :.|...:.:|   |...:.|        :.:...|.. ||:.
 Worm   196 RSGTEALQDKNDPVIQRIMER--VDEKHRIQEALHNSTADARW--------NPIGFVPRY-MTED 249

  Fly   326 PVYKPSKESKSWPAPAAGSDWLERTYNRVQDKELLEM--QDMRQCLSMHQPWASLLVAGIKKHEG 388
            ..: |.:|       .:..|.::.....:...||...  ::....|::.||.||.||.|:.:...
 Worm   250 GDH-PQQE-------CSDGDIIDADSLMIVSDELAAQITEEKGYVLALAQPTASFLVNGLCRFIR 306

  Fly   389 RVWYSE--HRGRLWIASTSKEPHAEDIAQMEGFYKVLYGDPDIKFPSHYPTSSLLGCVHVDSCLP 451
              |.::  .:|.|:|.:.:...:.:.|.:   |.|....|.:......:...::||...:..|:.
 Worm   307 --WPTDLNLKGPLFITAKAGGTNEKMIRE---FAKKYVRDVNKISELDFSDGAVLGRAFLQECMM 366

  Fly   452 QEEYRELY------PNGESESPYVFVCTKPEQLNILLPVHGDHKIYEL 493
            .|::.:.|      |.|:.:....|...:|....|......|..|||:
 Worm   367 LEDFLDKYGSKSAIPGGDGQFVLCFSAFEPLVSTIPHISTADSYIYEM 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11710NP_001285492.1 zf-C2HC5 120..168 CDD:283802 33/47 (70%)
ASCH_ASC-1_like 367..478 CDD:119346 25/118 (21%)
trip-4NP_497100.1 zf-C2HC5 38..81 CDD:368799 32/42 (76%)
ASCH 286..382 CDD:382341 21/100 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162591
Domainoid 1 1.000 72 1.000 Domainoid score I6097
eggNOG 1 0.900 - - E1_KOG2845
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9426
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5861
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1132270at2759
OrthoFinder 1 1.000 - - FOG0004371
OrthoInspector 1 1.000 - - oto17743
orthoMCL 1 0.900 - - OOG6_103387
Panther 1 1.100 - - LDO PTHR12963
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1813
SonicParanoid 1 1.000 - - X3093
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.690

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