DRSC/TRiP Functional Genomics Resources

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Protein Alignment cactin and cacn-1

DIOPT Version :9

Sequence 1:NP_523422.4 Gene:cactin / 33043 FlyBaseID:FBgn0031114 Length:720 Species:Drosophila melanogaster
Sequence 2:NP_001254422.1 Gene:cacn-1 / 175066 WormBaseID:WBGene00012230 Length:657 Species:Caenorhabditis elegans


Alignment Length:713 Identity:272/713 - (38%)
Similarity:391/713 - (54%) Gaps:115/713 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 RDKKREHKSRRRRSSSSSSSPSSSTSSSVPGAPRSPLVKSPMKLLQTLEARRLVEQKDRQRKKEE 129
            :|.|: ||..|||..|.|:|.|...                 :|.:.|..:|.:::.:::|:|||
 Worm     3 KDSKK-HKKERRRERSPSTSDSDEE-----------------RLQKRLAEQRSLKKDEKRRQKEE 49

  Fly   130 LKAHETPEEKRARRLREKQAKEQRRRERMGWDN---EYQTYSNEDNPFGDSNLTSTFHWGKKLEV 191
            :|.:|:.|||||||:.:|..|:.:|::....|.   ....|:|.:|||.|:.||.||.||||||.
 Worm    50 MKKNESAEEKRARRMEKKMRKDAKRKDADAEDTLIPPELNYTNLNNPFNDTKLTQTFVWGKKLER 114

  Fly   192 EGLSNLSTKTVEVLSLQKQLENRRELEKVKKRRQER-----ELERQVREDDLMMQQRAKEAVQFR 251
            ||.|.|:...:...:.|:..:|..|..:.|:.|..|     ::|...|:.||...|.:       
 Worm   115 EGKSGLTQDEITKQTSQRIRKNLHEAAEFKRIRDSRAAAKEDMEMMKRDADLRAGQIS------- 172

  Fly   252 EWQRQEDQFHLEQARLRSEIRIRDGRAKPIDLLAQYV--AAGNEPLEECLEMQMHEP--YVLLNG 312
              ..:|.:|.::|.:.|:.|||..||||.||||::|.  |..|....:..:.::..|  |:..:.
 Worm   173 --DTKEREFQMDQIKERTRIRIDQGRAKAIDLLSRYARFADENPHTAKIPDFELENPMEYLKASC 235

  Fly   313 LPVEELEDLLVDIKVYEELE-QGKHIDFWNDMITIVQDELQRQQKLEAENSSLNQRRDGIHQAVV 376
            ..|::.|||:.|||.|.|:: ..|:..:|.|:..|.:||:|::..         |.|..:|.:|.
 Worm   236 KSVDDYEDLIEDIKTYREVDGWAKNETWWMDVTRIAEDEIQKKAA---------QNRGDVHASVQ 291

  Fly   377 KDVADIFRGKNAQQLEEMRHRIEAKISGRADGVDISYWESLLSQLKAHMARARLRDRHQALLREK 441
            .:|.::|:.|:..:|.::..:::|||.|.:.  :..||:.|..|||..:||.|||:.|..:||.:
 Worm   292 TEVQNMFKNKSIDELLKLEDQMDAKIRGNSG--NKGYWQDLDDQLKVFIARKRLREHHGRVLRLQ 354

  Fly   442 LSLLKRENDNETLQE---------KVAPQVK------EEEMETQDAE----------------DP 475
            |:::|.|...|..|:         :|.||||      |||.|.:|.|                ||
 Worm   355 LAIIKEEQKKEIQQQESEELLPVAEVPPQVKIQKEEEEEEEEDEDDEKISKKVRRKIDVQTLDDP 419

  Fly   476 EVEEGSPEDEE-------DPLNELRKTVRLYQAGNYSPRYIREEDFTGRRAQNEDVDEPEAEGLL 533
            |::|  ||.|.       |.|:::  |..||:.|.|||.||..:|           ..|..| :|
 Worm   420 ELDE--PERERKWRALTGDQLDDV--TRELYRIGCYSPTYISADD-----------TMPGIE-IL 468

  Fly   534 YEEED----DERRTQRQRLLILHPERVDNNQLTPQ--ELRMRNEAKQGMQGDEAEFSVETTLDAV 592
            .|:.|    .|||.:.:..|   |.....:...||  ..:|...|::||:.||:.|..|..|.|.
 Worm   469 DEQADVDNLTERRNRNRGTL---PSSSAASSGAPQGASSKMMAIAREGMEADESIFGAEEQLAAQ 530

  Fly   593 PQLATDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLMDKSQTPQYF 657
            ..|.:||||||||.|.|||.|||:||||||||||.||||||||||||||||||||:|.:..|::.
 Worm   531 RHLWSDKYRPRKPTYLNRVQTGFDWNKYNQTHYDQDNPPPKIVQGYKFNIFYPDLLDMTVAPRFG 595

  Fly   658 LTPCADNGDFAVLRFHTGPPYEDIAFKIVNREWEFSYKRGFRCQFHNNIFQLWFHFKRYRYRR 720
            ||.|.| .|||::||..||||||||||:||||||..:|.|::|||.|.:|||||.||:|||||
 Worm   596 LTSCED-PDFAIIRFKAGPPYEDIAFKVVNREWETLHKNGYKCQFQNGVFQLWFMFKKYRYRR 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cactinNP_523422.4 Endonuc_Holl 202..>274 CDD:295105 17/76 (22%)
Cactin_mid 243..432 CDD:287304 58/193 (30%)
CactinC_cactus 598..720 CDD:286775 88/121 (73%)
cacn-1NP_001254422.1 Cactin_mid 175..345 CDD:287304 58/180 (32%)
CactinC_cactus 534..657 CDD:286775 88/123 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167999
Domainoid 1 1.000 210 1.000 Domainoid score I1650
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H69553
Inparanoid 1 1.050 425 1.000 Inparanoid score I980
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54753
OrthoDB 1 1.010 - - D1252926at2759
OrthoFinder 1 1.000 - - FOG0005003
OrthoInspector 1 1.000 - - oto18097
orthoMCL 1 0.900 - - OOG6_102945
Panther 1 1.100 - - LDO PTHR21737
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1715
SonicParanoid 1 1.000 - - X4073
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

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