DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp19d and Obp56d

DIOPT Version :9

Sequence 1:NP_523421.2 Gene:Obp19d / 33040 FlyBaseID:FBgn0011280 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_001286619.1 Gene:Obp56d / 37266 FlyBaseID:FBgn0034470 Length:131 Species:Drosophila melanogaster


Alignment Length:142 Identity:38/142 - (26%)
Similarity:62/142 - (43%) Gaps:20/142 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHLVHLTVLLLVGILCLGATSAKPHEEINRDHAAELANE--CKAETGATDEDVEQLMSHDLPER 63
            |..|:.|:|:|        |.||...:..:...|...||.  |..:.|.|.:....|.:.:..:.
  Fly     1 MKFLIVLSVIL--------AISAAELQLSDEQKAVAHANGALCAQQEGITKDQAIALRNGNFDDS 57

  Fly    64 H-EAKCLRACVMKKLQIMDESGKLNKEHAIELVKVMSK-HDAEKEDAPAEVVAKCEAIETPEDHC 126
            . :.||...|.::|:..:     :|.|  ::...|::| .....|||...|.|||:|.: ..|.|
  Fly    58 DPKVKCFANCFLEKIGFL-----INGE--VQPDVVLAKLGPLAGEDAVKAVQAKCDATK-GADKC 114

  Fly   127 DAAFAYEECIYE 138
            |.|:...||.|:
  Fly   115 DTAYQLFECYYK 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp19dNP_523421.2 PBP_GOBP 23..139 CDD:279703 31/120 (26%)
Obp56dNP_001286619.1 PBP_GOBP 19..127 CDD:279703 30/116 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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