DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp19d and Obp19b

DIOPT Version :9

Sequence 1:NP_523421.2 Gene:Obp19d / 33040 FlyBaseID:FBgn0011280 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_608391.2 Gene:Obp19b / 33038 FlyBaseID:FBgn0031110 Length:163 Species:Drosophila melanogaster


Alignment Length:159 Identity:36/159 - (22%)
Similarity:79/159 - (49%) Gaps:15/159 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHLVHLTVLLL----VGILCLGATSAKPHEEINRDHAAEL----ANECKAETGATDEDVEQLMS 57
            |:..:.:|.|||    ..:|...||:.:....:..|...||    .:.|..:  .:.|::.:::.
  Fly     7 MTTTLKMTNLLLAVACAAVLMGSATADEEEGSMTVDEVVELIEPFGDACTPK--PSRENIVEMVL 69

  Fly    58 HDLPERHEAKCLRACVMKKLQIMDESG-KLNKEHAIELVKVMSKHDAEKEDAPAEVVAKC-EAIE 120
            :....:||.||.|.|::::.::|.|.. :.|::..::::.:|.   .::||....:|..| |.::
  Fly    70 NKEDAKHETKCFRHCMLEQFELMPEDQLQYNEDKTVDMINMMF---PDREDDGRRIVKTCNEELK 131

  Fly   121 TPEDHCDAAFAYEECIYEQMKEHGLELEE 149
            ..:|.|:||.....|:..:|:..|.::.|
  Fly   132 AEQDKCEAAHGIAMCMLREMRSSGFKIPE 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp19dNP_523421.2 PBP_GOBP 23..139 CDD:279703 25/121 (21%)
Obp19bNP_608391.2 PBP_GOBP 38..150 CDD:279703 25/116 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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