DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp19d and Obp56c

DIOPT Version :9

Sequence 1:NP_523421.2 Gene:Obp19d / 33040 FlyBaseID:FBgn0011280 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster


Alignment Length:91 Identity:22/91 - (24%)
Similarity:41/91 - (45%) Gaps:12/91 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 DLPERHEAKCLRACVMKKLQIMDESGKLNKEHAIELVKVMSKHDAEKEDAPAEVVAKCEAIETPE 123
            ||......:|..:|:.:.|. :|....|.:|.....|:.:.:|  ||.:     :.:|..:: .:
  Fly   127 DLKHNEPLQCFVSCLYETLD-LDRYNVLLEEAFKNQVQTIIQH--EKAE-----IKECSDLQ-GK 182

  Fly   124 DHCDAAFAYEECIYEQMKEHGLELEE 149
            ..|:||:....| |..:|.  ||.|:
  Fly   183 TRCEAAYKLHLC-YNHLKT--LEAEQ 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp19dNP_523421.2 PBP_GOBP 23..139 CDD:279703 18/79 (23%)
Obp56cNP_995902.1 PBP_GOBP <125..195 CDD:279703 17/77 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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