DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp19c and Obp56a

DIOPT Version :10

Sequence 1:NP_608392.1 Gene:Obp19c / 33039 FlyBaseID:FBgn0031111 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_611442.1 Gene:Obp56a / 37264 FlyBaseID:FBgn0034468 Length:139 Species:Drosophila melanogaster


Alignment Length:115 Identity:30/115 - (26%)
Similarity:55/115 - (47%) Gaps:17/115 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 NLPQVQ-ELVTAARMECIQKLQLPRDQRPLGKV-----TNPSEKEKCLVECVLKKI-KLMDADNK 111
            ||...| :|....|.:|.::::|..:::  .||     .||:|..||...|..:|: .|.|.:.:
  Fly    23 NLSDEQKDLAKQHREQCAEEVKLTEEEK--AKVNAKDFNNPTENIKCFANCFFEKVGTLKDGELQ 85

  Fly   112 LNVGQVEKLTSLVTQDNKMAIAVSSSMAQACSRGISSKNPCEVAHLFNQC 161
            .:| .:|||.:|:.::.      :.:..:.| |.|..:|.|:.|.....|
  Fly    86 ESV-VLEKLGALIGEEK------TKAALEKC-RTIKGENKCDTASKLYDC 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp19cNP_608392.1 PhBP 65..164 CDD:214783 26/103 (25%)
Obp56aNP_611442.1 PBP_GOBP 24..128 CDD:460193 29/114 (25%)

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