DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp19c and Obp56f

DIOPT Version :10

Sequence 1:NP_608392.1 Gene:Obp19c / 33039 FlyBaseID:FBgn0031111 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_725926.1 Gene:Obp56f / 246668 FlyBaseID:FBgn0043533 Length:125 Species:Drosophila melanogaster


Alignment Length:153 Identity:30/153 - (19%)
Similarity:54/153 - (35%) Gaps:43/153 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LMTIVVAVLLQTHCVRGQTQAFDLAKLLPKTGTEPIWAVIDRNLPQVQELVTAARMECIQKLQLP 76
            |...:.|:.||..|::               .:|.|.|.:.|.|.......|        |....
  Fly     6 LFIFISAIWLQAFCMK---------------SSEKIKACLKRQLGYTITENT--------KFDAK 47

  Fly    77 RDQRPLGKVTNPSEKEKCLVECVLKKIKLMDADNKLNVGQVEKLTSLVTQDNKMAIAVSSSMAQA 141
            .|          |.:.||...|:| ::|.:.|::.::..|..|:.     :.|..|..:..:.:|
  Fly    48 ED----------SLQSKCFYHCLL-EVKGVIANDAISSEQPRKVL-----EKKYGITDTDELEKA 96

  Fly   142 ---CSRGISSKNPCEVAHLFNQC 161
               | ..|.:...||:.:...:|
  Fly    97 EEKC-HSIKASGKCELGYEILKC 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp19cNP_608392.1 PhBP 65..164 CDD:214783 19/100 (19%)
Obp56fNP_725926.1 PBP_GOBP <49..120 CDD:460193 18/87 (21%)

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