DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Obp19b and Obp56g

DIOPT Version :10

Sequence 1:NP_608391.2 Gene:Obp19b / 33038 FlyBaseID:FBgn0031110 Length:163 Species:Drosophila melanogaster
Sequence 2:NP_995903.1 Gene:Obp56g / 37270 FlyBaseID:FBgn0034474 Length:132 Species:Drosophila melanogaster


Alignment Length:160 Identity:36/160 - (22%)
Similarity:60/160 - (37%) Gaps:44/160 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MTTTLKMTNLLLAVAC-AAVLMGSATADEEEGSMTVDEVVELIEPFGDACTPKPSRENIVEMVLN 70
            |..|..:|.||   .| :.:|...|..|   .|::.:.|.:.::..|  .||    :::.::...
  Fly     1 MRATFALTLLL---GCLSGILAQQANID---SSVSKELVTDCLKENG--VTP----QDLADLQSG 53

  Fly    71 K---EDAKHETKCFRHCMLEQFELMPEDQLQYNEDKT----VDMINMMFPDREDDGRRIVKTCNE 128
            |   ||||...||...|:|.:...|         |.|    .|.|...:.:         ....:
  Fly    54 KVKAEDAKDNVKCSSQCILVKSGFM---------DSTGKLLTDKIKSYYAN---------SNFKD 100

  Fly   129 ELKAEQDKCEAAHGIAMCMLREMRSSGFKI 158
            .::.:.|:|.|..|...|      .:.|||
  Fly   101 VIEKDLDRCSAVKGANAC------DTAFKI 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp19bNP_608391.2 PBP_GOBP 39..150 CDD:460193 23/117 (20%)
Obp56gNP_995903.1 PhBP 32..132 CDD:214783 26/123 (21%)

Return to query results.
Submit another query.