DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp19b and Obp56d

DIOPT Version :10

Sequence 1:NP_608391.2 Gene:Obp19b / 33038 FlyBaseID:FBgn0031110 Length:163 Species:Drosophila melanogaster
Sequence 2:NP_611444.2 Gene:Obp56d / 37266 FlyBaseID:FBgn0034470 Length:131 Species:Drosophila melanogaster


Alignment Length:146 Identity:30/146 - (20%)
Similarity:58/146 - (39%) Gaps:45/146 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LKMTNLLLAVACAAVLM----------GSATADEEEGSMTVDEVVELIEPFGDACTPKPSRENIV 65
            |.:.:::||::.|.:.:          ..|...::|| :|.|:.:.|             |..  
  Fly     4 LIVLSVILAISAAELQLSDEQKAVAHANGALCAQQEG-ITKDQAIAL-------------RNG-- 52

  Fly    66 EMVLNKEDAKHETKCFRHCMLEQFELMPEDQLQYNEDKTVDMINMMFPDREDDGRRIVKTCNEEL 130
                |.:|:..:.|||.:|.||:...:...::|.:.     ::..:.|...:|.          :
  Fly    53 ----NFDDSDPKVKCFANCFLEKIGFLINGEVQPDV-----VLAKLGPLAGEDA----------V 98

  Fly   131 KAEQDKCEAAHGIAMC 146
            ||.|.||:|..|...|
  Fly    99 KAVQAKCDATKGADKC 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp19bNP_608391.2 PBP_GOBP 39..150 CDD:460193 23/108 (21%)
Obp56dNP_611444.2 PBP_GOBP 19..127 CDD:460193 26/131 (20%)

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