DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp19b and Obp47a

DIOPT Version :9

Sequence 1:NP_608391.2 Gene:Obp19b / 33038 FlyBaseID:FBgn0031110 Length:163 Species:Drosophila melanogaster
Sequence 2:NP_610632.1 Gene:Obp47a / 36162 FlyBaseID:FBgn0033573 Length:165 Species:Drosophila melanogaster


Alignment Length:148 Identity:39/148 - (26%)
Similarity:60/148 - (40%) Gaps:35/148 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 MGSATADEEEGSMTVDEVVELIEPFGDACTPKPSRENIVEMVLNK------EDAKHETKCFRHCM 85
            :|...|||...::| :|::.|.   ||. |....||      |||      .|.....:||.||:
  Fly    28 LGLTVADESPKTIT-EEMIRLC---GDQ-TDISLRE------LNKLQREDFSDPSESVQCFTHCL 81

  Fly    86 LEQFELMPEDQLQYNED---KTVDMINM-MFPDREDDGRRIVKTCNEELKAEQDKCEAAHGIAMC 146
            .||..|| .|.:....|   ...|:.|. .:|:|:....|           ..:|||.|:.|..|
  Fly    82 YEQMGLM-HDGVFVERDLFGLLSDVSNTDYWPERQCHAIR-----------GNNKCETAYRIHQC 134

  Fly   147 --MLREMRSSGFKIPEIK 162
              .|::.:.:.....|::
  Fly   135 QQQLKQQQQNLLATKEVE 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp19bNP_608391.2 PBP_GOBP 38..150 CDD:279703 34/123 (28%)
Obp47aNP_610632.1 PBP_GOBP 48..132 CDD:279703 28/105 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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