DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp19b and Obp19c

DIOPT Version :9

Sequence 1:NP_608391.2 Gene:Obp19b / 33038 FlyBaseID:FBgn0031110 Length:163 Species:Drosophila melanogaster
Sequence 2:NP_608392.1 Gene:Obp19c / 33039 FlyBaseID:FBgn0031111 Length:175 Species:Drosophila melanogaster


Alignment Length:122 Identity:25/122 - (20%)
Similarity:54/122 - (44%) Gaps:11/122 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 EVVELIEPFGDACTPK---PSRENIVEMVLNKEDAKHETKCFRHCMLEQFELMPEDQLQYNEDKT 104
            :|.||:......|..|   |..:..:..|.|..:   :.||...|:|::.:||..|. :.|..:.
  Fly    57 QVQELVTAARMECIQKLQLPRDQRPLGKVTNPSE---KEKCLVECVLKKIKLMDADN-KLNVGQV 117

  Fly   105 VDMINMMFPDRE---DDGRRIVKTCNEELKAEQDKCEAAHGIAMCMLREMRSSGFKI 158
            ..:.:::..|.:   .....:.:.|:..: :.::.||.||....|:.|::..:..|:
  Fly   118 EKLTSLVTQDNKMAIAVSSSMAQACSRGI-SSKNPCEVAHLFNQCISRQLERNNVKL 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp19bNP_608391.2 PBP_GOBP 38..150 CDD:279703 23/112 (21%)
Obp19cNP_608392.1 PhBP 65..164 CDD:214783 20/103 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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