DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Obp19a and LOC1279004

DIOPT Version :10

Sequence 1:NP_728338.2 Gene:Obp19a / 33037 FlyBaseID:FBgn0031109 Length:146 Species:Drosophila melanogaster
Sequence 2:XP_318661.3 Gene:LOC1279004 / 1279004 VectorBaseID:AGAMI1_006572 Length:155 Species:Anopheles gambiae


Alignment Length:143 Identity:51/143 - (35%)
Similarity:78/143 - (54%) Gaps:5/143 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLVCVAISLGPIPQSEAGVTEEQMWSAGKLMRDVCLPKYPKVSVEVADNIRNGDIPNSKDTNCYI 70
            :|..||....|.|..|..:|.:|:.::..:||..|.||: |||.|:.||:|.|.....::..||.
Mosquito    16 ILGLVAFFFIPFPSVECAMTRKQLINSMDMMRSACAPKF-KVSTEMLDNLRGGIFAEDRELKCYT 79

  Fly    71 NCILEMMQAI-KKGKFQLESTLKQMDIMLPDSYKDEYRKGINLCKDSTVGLKNAPNCDPAHALLS 134
            .||.:|...: |||:..::.||.|||.|||...:|:.:|.|:.|:|.....|:  :||.......
Mosquito    80 MCIAQMAGTMNKKGEINVQKTLAQMDAMLPPDMRDKAKKAIHSCRDVQGRYKD--SCDKTFYSTK 142

  Fly   135 CL-KNNIKVFVFP 146
            || :.:..||:||
Mosquito   143 CLAEYDRDVFLFP 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp19aNP_728338.2 PBP_GOBP 25..139 CDD:460193 41/115 (36%)
LOC1279004XP_318661.3 None

Return to query results.
Submit another query.