Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006516872.1 | Gene: | Hecw1 / 94253 | MGIID: | 2444115 | Length: | 1605 | Species: | Mus musculus |
Alignment Length: | 1780 | Identity: | 337/1780 - (18%) |
---|---|---|---|
Similarity: | 565/1780 - (31%) | Gaps: | 633/1780 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 3321 FVNKKPALVIGLDAVFVNRVACGSSHSIAWGLPNASSDEEKRGPVPFSSTRDPLGGSSLGIYEAE 3385
Fly 3386 -------TMQTLKQEAK-------PLNQSSLSESLALETPAAR---QAALGHVLRAMSILQARQL 3433
Fly 3434 IVAALTSHSKVNFKERGAVGGEEDHLIGGPIMGAPLQLAET--------IAQGGGEAPADAT--- 3487
Fly 3488 -DA---------GL-------QEHSPEAAVDALTGGMSG--GAN------------------TLP 3515
Fly 3516 PLSAGPLSAFQSLTGSLSMSGSLSSSALPQHKHSRMSASAMSVMAATMTQQEEMLSHISHCHGLD 3580
Fly 3581 DFGGL-LGEPEAKSLVELLKLAVCGRCGPPSTSQTIADTLISLGAG---TPAVAAMLLETCI--- 3638
Fly 3639 --------TELEDLCTSRHCLGKLPKPVMQESSHPYVDNVNVTGVVRIPGAEMLRLEFDSQCSTE 3695
Fly 3696 KRNDPLVIMDG--TGRVLAMRSGREFAHWAPEIRVLGDELRWKFSSDSSVNGWGWRFWVHAIMPA 3758
Fly 3759 ATLGESGSDRAVLSQPSMALVMSLLDSRLAPRQPSVLLRLASALAACSQLGALTTAQRIWSLRKL 3823
Fly 3824 HAVLLLEQAPRPQDPSLSTLLQPLIPELLRQYEYEEPQVRGGIHLMHSDYFKTLAALACDMQ-LD 3887
Fly 3888 AALPATSSSSSSSAAPGAISST---GDVHKWAWFKRYCI--AVRVAQSLIRRTELPRAFCLEVRK 3947
Fly 3948 KFAEMLPSS--------SSNSNANP---GCQSPGASMLNSTTSLSSSTVSNVSPPPGITGEQPDL 4001
Fly 4002 HCHAHQLESTSTLLHEDHTLFQAPHDAQLLQWLNRRPDDWALSWGGASTIYGWGHNHRGQLGGLE 4066
Fly 4067 GSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSL 4131
Fly 4132 QHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR-MSYDRPKLVEHLNGMSVADIAC 4195
Fly 4196 GSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDD 4260
Fly 4261 DNVWSWGDGDYGKLGRGGSD---------------GCKLP---YKIESLAGLGVVKVECGSQFSV 4307
Fly 4308 ALTKSGAVY------TWGK----------GDFHRLGHGS-------------------------- 4330
Fly 4331 ------VDHVRR------PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTV 4383
Fly 4384 TAIQRP--RLVAALQGKHIVKVTCGSAHTLALSTSQLSERLRPLPNPPLEYDLVRDLAP------ 4440
Fly 4441 ---EALH-ARLILLHHFSELVCPC-LAMLPISGDLSLGALKDVLVYNIKEAAFRKVI----QTTM 4496
Fly 4497 VRDKQHGPVIELNRIQVK-----------RSRNRCNGLAGIDGMKSVFGQMVQKLPLLTQ----- 4545
Fly 4546 -----EALA-----LPHRVWKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLINTPNGRGEA 4600
Fly 4601 GANRDCFLLDPTLSSVLQ--MNMFRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPTDLTE 4663
Fly 4664 ---VDRDYVAGLLCIR--NMDDDPKL-FTALELPFSTSSARGHEVPLSTRYTHISPRNRAEYVRL 4722
Fly 4723 ALGFRLHE-FDEQVKAVRDGMSKVIPVPLLSLFSAAELQAMVCGSPDIPLGLLKSVATYK-GFDP 4785
Fly 4786 SSALVTWFWEVMEEFTNQERSLFLRFVWGRTRLP-RTIADFRGRDFVLQ-VLEKNPPDHFLPESY 4848
Fly 4849 TCFFLLKMPRYSCKAVLLEKLKYAI 4873 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | |||
RCC1 | 3091..3140 | CDD:278826 | |||
RCC1 | 3144..3194 | CDD:278826 | |||
RCC1 | 3197..3246 | CDD:278826 | |||
RCC1 | 3250..3298 | CDD:278826 | |||
RCC1 | 3302..3350 | CDD:278826 | 8/28 (29%) | ||
RCC1_2 | 4136..4166 | CDD:290274 | 2/29 (7%) | ||
RCC1 | 4154..4203 | CDD:278826 | 13/49 (27%) | ||
RCC1 | 4206..4257 | CDD:278826 | 5/50 (10%) | ||
RCC1 | 4260..4309 | CDD:278826 | 16/66 (24%) | ||
RCC1 | 4312..4360 | CDD:278826 | 15/101 (15%) | ||
RCC1 | 4364..4413 | CDD:278826 | 11/50 (22%) | ||
HECTc | 4509..4880 | CDD:238033 | 99/403 (25%) | ||
HECTc | 4553..4878 | CDD:214523 | 88/333 (26%) | ||
Hecw1 | XP_006516872.1 | HECW_N | 66..185 | CDD:374632 | |
C2_NEDL1-like | 206..342 | CDD:176073 | 30/142 (21%) | ||
Neuromodulin | 378..500 | CDD:369001 | 27/129 (21%) | ||
WW | 829..858 | CDD:366073 | 7/100 (7%) | ||
HECW1_helix | 947..1013 | CDD:375862 | 11/65 (17%) | ||
WW | 1019..1050 | CDD:197736 | 5/32 (16%) | ||
HECTc | 1249..1603 | CDD:238033 | 91/361 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |