Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_024308991.1 | Gene: | TRIP12 / 9320 | HGNCID: | 12306 | Length: | 2092 | Species: | Homo sapiens |
Alignment Length: | 2375 | Identity: | 464/2375 - (19%) |
---|---|---|---|
Similarity: | 726/2375 - (30%) | Gaps: | 760/2375 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 2960 PGSTAGAGAVSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLGGLK----------GSKVKVPTF-S 3013
Fly 3014 QTISRLRPIHIAG---GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKK 3075
Fly 3076 VAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI 3140
Fly 3141 SSQGELYTWGLGEYGRLGHGDNTTQLK----PKLVTALAGRRVVQVACGSRDAQTLALTEDGAVF 3201
Fly 3202 SWGDGDFGKLGRGGSEGSDTPHEIERLS------GIGVVQIECGA----QFSLALTRAGEVWTWG 3256
Fly 3257 KGDYYRLGHGGDQH-------VRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWG------ 3308
Fly 3309 ----DNDHGQQGSGNTFVNKK-PALVIGLDA--VFVNRVACGSSHSIAWGLPN--ASSDEEKRGP 3364
Fly 3365 VPFSSTRDPLGGSSLGIYEAETMQTLKQEAKPLNQSSLSESLALETPAARQAALGHVLRAMSILQ 3429
Fly 3430 ARQLIVAALTS-HSKVNFKERGAV------GGEEDHLIG--GPIMGAPLQLAETIAQGGGEAPAD 3485
Fly 3486 ATDAGLQ----EHSPEAAVDALTGGMSGGANTL---PPLSAGPL---------------SAFQSL 3528
Fly 3529 T---GSLSMSGSLSSSALPQHKHSRMSASAMSVMAATMTQQEEMLSHISHCHGLDDFGGLLGEPE 3590
Fly 3591 AKSLVEL---------LKLAVCGRCG---PPSTSQTIADTLISLGAGTPAVAAMLLETCITELED 3643
Fly 3644 LCTSRHCLGKL-------PKPVMQESSHPYVDNVNVTGVVRIPGAE-----MLRLEFDSQCSTEK 3696
Fly 3697 RNDPLV---------------IMDGTGR-------VLAMRSGREFAHWA----------PEIRVL 3729
Fly 3730 GDELRWKFSSDSSVNG--WGWRFWVHAIMPAATLGESGSDRAVLSQPSMALVMSLLDSRLAPRQP 3792
Fly 3793 SVLLRLASALAACSQLG----ALTTAQRIW-----SLRKLH----AVLLLEQAPRP-QDPSLSTL 3843
Fly 3844 LQPLIPELLRQYEYEEPQVRGGIHLMHSDYFKTLAALACDMQLDAALPAT--------------- 3893
Fly 3894 ---------SSSSSSSAAPGAISSTGDVHKWAWFKRYCIAVRVAQSLIRRTELPRAFCLEVRKK- 3948
Fly 3949 ---FAEMLPSSSSNSNANPGCQSPGASMLNSTTSLSSSTVSNVSPPPGITGEQPDLHCHAHQLES 4010
Fly 4011 T-----STLLH---------------------------EDHTLFQAPHDAQLLQWLNRRPDDWAL 4043
Fly 4044 SWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPD-------- 4100
Fly 4101 --------GKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVN---SGGKHCL----A 4150
Fly 4151 LTTEGEV----------------YAWGEGEDGKLGHGNRMS------YDRP-------------- 4179
Fly 4180 -----KLVEHLNG---------MSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLR 4230
Fly 4231 PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLA--- 4292
Fly 4293 ---------GLG---------------------VVKVECGSQFSVALTKSGAVYTW--------- 4318
Fly 4319 ---GKGDF-HRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 4379
Fly 4380 --DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTSQLSER---------LRPLPNPPLEYD 4433
Fly 4434 LVRDLAPE-------ALHARLIL--LHHFSEL------VCPCLAMLP----ISGDLSLGA---LK 4476
Fly 4477 DVLVY---NI------------------------------KEAAFRKVIQT------TMVRDKQH 4502
Fly 4503 GPVIE-----LNRIQ-VKRSRNRCNGLAGIDGMKSV---------FGQMVQKLPLLTQEALALPH 4552
Fly 4553 RVWKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLSSVL 4617
Fly 4618 QMNM-FRFLGVLMGIAVR----TGSPLSINLAEPVWRQLTGEVLRPTDLTEVDRDYVAGLLCIRN 4677
Fly 4678 M--------DDDPKLFTALELPFSTSSARGHEV-PLSTRYT----------------HISPRNRA 4717
Fly 4718 EYVRLALGFRLHE-FDEQVKAVRDGMSKVIPVPLLSLFSAAELQAMVCGSP----DIPLGLLKSV 4777
Fly 4778 ATYKGFDPSSALVTWFWEVMEEFTNQERSLFLRFVWGRTRLPRTIADFRGRDFVLQVLEK----- 4837
Fly 4838 NPPDHFLPESYTCFFLLKMPRYSCKAVLLEKLKYA 4872 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | 5/50 (10%) | ||
RCC1 | 3091..3140 | CDD:278826 | 8/48 (17%) | ||
RCC1 | 3144..3194 | CDD:278826 | 13/53 (25%) | ||
RCC1 | 3197..3246 | CDD:278826 | 11/58 (19%) | ||
RCC1 | 3250..3298 | CDD:278826 | 8/54 (15%) | ||
RCC1 | 3302..3350 | CDD:278826 | 10/60 (17%) | ||
RCC1_2 | 4136..4166 | CDD:290274 | 9/52 (17%) | ||
RCC1 | 4154..4203 | CDD:278826 | 12/98 (12%) | ||
RCC1 | 4206..4257 | CDD:278826 | 7/50 (14%) | ||
RCC1 | 4260..4309 | CDD:278826 | 14/81 (17%) | ||
RCC1 | 4312..4360 | CDD:278826 | 11/60 (18%) | ||
RCC1 | 4364..4413 | CDD:278826 | 12/50 (24%) | ||
HECTc | 4509..4880 | CDD:238033 | 103/414 (25%) | ||
HECTc | 4553..4878 | CDD:214523 | 94/360 (26%) | ||
TRIP12 | XP_024308991.1 | SR-25 | 99..>233 | CDD:313680 | 38/193 (20%) |
Arm_3 | 489..>714 | CDD:330530 | 50/241 (21%) | ||
WWE | 808..874 | CDD:308464 | 18/100 (18%) | ||
HECTc | 1690..2090 | CDD:238033 | 103/418 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |