| Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001017919.1 | Gene: | RCCD1 / 91433 | HGNCID: | 30457 | Length: | 376 | Species: | Homo sapiens |
| Alignment Length: | 388 | Identity: | 102/388 - (26%) |
|---|---|---|---|
| Similarity: | 161/388 - (41%) | Gaps: | 94/388 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 4037 RPDDWALSWGGASTIYGWGHNHRGQ-LGGLEGSRIKTPTPCEA-LSLLRPVQLAGGEQSLFAVTP 4099
Fly 4100 DGKLFATGYGSG--GRLGVGGSDSWAIPTLLG---------SLQHVFVKKVAVNSGGKHCLALT- 4152
Fly 4153 ---TEGEVYAWGEGEDGKLG--------HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITAS 4206
Fly 4207 GHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWG---- 4267
Fly 4268 --------------------------DGDYGKLGRGGSDGCKLPY--------KIESLAGLGVVK 4298
Fly 4299 VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 4361 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
| RCC1 | 687..737 | CDD:278826 | |||
| RCC1 | 740..787 | CDD:278826 | |||
| RCC1 | 790..841 | CDD:278826 | |||
| RCC1_2 | 828..857 | CDD:290274 | |||
| Cyt-b5 | 1290..1363 | CDD:278597 | |||
| MIB_HERC2 | 1928..1987 | CDD:284184 | |||
| UBA_HERC2 | 2515..2559 | CDD:270585 | |||
| Cul7 | 2624..2699 | CDD:288381 | |||
| APC10-HERC2 | 2762..2932 | CDD:176485 | |||
| RCC1 | 3037..3088 | CDD:278826 | |||
| RCC1 | 3091..3140 | CDD:278826 | |||
| RCC1 | 3144..3194 | CDD:278826 | |||
| RCC1 | 3197..3246 | CDD:278826 | |||
| RCC1 | 3250..3298 | CDD:278826 | |||
| RCC1 | 3302..3350 | CDD:278826 | |||
| RCC1_2 | 4136..4166 | CDD:290274 | 8/33 (24%) | ||
| RCC1 | 4154..4203 | CDD:278826 | 13/56 (23%) | ||
| RCC1 | 4206..4257 | CDD:278826 | 21/50 (42%) | ||
| RCC1 | 4260..4309 | CDD:278826 | 15/86 (17%) | ||
| RCC1 | 4312..4360 | CDD:278826 | 13/47 (28%) | ||
| RCC1 | 4364..4413 | CDD:278826 | |||
| HECTc | 4509..4880 | CDD:238033 | |||
| HECTc | 4553..4878 | CDD:214523 | |||
| RCCD1 | NP_001017919.1 | Interaction with KDM8. /evidence=ECO:0000269|PubMed:24981860 | 1..169 | 47/186 (25%) | |
| ATS1 | <156..340 | CDD:227511 | 51/189 (27%) | ||
| RCC1 2 | 176..227 | 22/52 (42%) | |||
| RCC1 3 | 229..317 | 15/87 (17%) | |||
| RCC1 4 | 318..371 | 15/50 (30%) | |||
| RCC1 | 319..366 | CDD:395335 | 15/49 (31%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.820 | |||||