| Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_176767.1 | Gene: | AT1G65920 / 842904 | AraportID: | AT1G65920 | Length: | 1006 | Species: | Arabidopsis thaliana |
| Alignment Length: | 669 | Identity: | 158/669 - (23%) |
|---|---|---|---|
| Similarity: | 268/669 - (40%) | Gaps: | 142/669 - (21%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2731 CPLRL-----------GRSQGSSAIGVVSSVRSKQLTVDFPDQPAWQGHINEVELVASQPTSATL 2784
Fly 2785 PSLGDSCSQMPPSDLIEDWSRCIRSLTVSSNEAAAKHLLNGSNQPWQSCSSGPCRHWIRLELHDR 2849
Fly 2850 ILVHSLTLKVSPEDHSHMPSLLEIRVGDCVDSLKEYTWIPVPAGASRVLLMQQVPTYYPWVEVVV 2914
Fly 2915 KQCQNNGIQCKIHGIKFVGRRQQPDLQHILANAQFLASEYSAGVGPGS----------------T 2963
Fly 2964 AGAGAVSTSHEEAAAAPEQDL---PCT-------VMVWGLNDKEQLGGLKGSK----VKVPTFSQ 3014
Fly 3015 TISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVH 3079
Fly 3080 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAK-KIRDVACGSSHSAAISSQ 3143
Fly 3144 GELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTED----------- 3197
Fly 3198 -GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYY 3261
Fly 3262 RLG--HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNK 3324
Fly 3325 KPALVIGLDAVFVNRVACG 3343 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
| RCC1 | 687..737 | CDD:278826 | |||
| RCC1 | 740..787 | CDD:278826 | |||
| RCC1 | 790..841 | CDD:278826 | |||
| RCC1_2 | 828..857 | CDD:290274 | |||
| Cyt-b5 | 1290..1363 | CDD:278597 | |||
| MIB_HERC2 | 1928..1987 | CDD:284184 | |||
| UBA_HERC2 | 2515..2559 | CDD:270585 | |||
| Cul7 | 2624..2699 | CDD:288381 | |||
| APC10-HERC2 | 2762..2932 | CDD:176485 | 26/169 (15%) | ||
| RCC1 | 3037..3088 | CDD:278826 | 14/50 (28%) | ||
| RCC1 | 3091..3140 | CDD:278826 | 12/49 (24%) | ||
| RCC1 | 3144..3194 | CDD:278826 | 20/49 (41%) | ||
| RCC1 | 3197..3246 | CDD:278826 | 15/60 (25%) | ||
| RCC1 | 3250..3298 | CDD:278826 | 14/49 (29%) | ||
| RCC1 | 3302..3350 | CDD:278826 | 17/42 (40%) | ||
| RCC1_2 | 4136..4166 | CDD:290274 | |||
| RCC1 | 4154..4203 | CDD:278826 | |||
| RCC1 | 4206..4257 | CDD:278826 | |||
| RCC1 | 4260..4309 | CDD:278826 | |||
| RCC1 | 4312..4360 | CDD:278826 | |||
| RCC1 | 4364..4413 | CDD:278826 | |||
| HECTc | 4509..4880 | CDD:238033 | |||
| HECTc | 4553..4878 | CDD:214523 | |||
| AT1G65920 | NP_176767.1 | PH_PLC_plant-like | 14..126 | CDD:270171 | 16/92 (17%) |
| ATS1 | <291..646 | CDD:227511 | 104/341 (30%) | ||
| FYVE | 639..699 | CDD:366594 | |||
| Smc | <798..>864 | CDD:224117 | |||
| BRX_N | 839..874 | CDD:372684 | |||
| BRX | 948..1001 | CDD:369842 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 1 | 1.000 | - | - | otm3500 | |
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 4 | 3.820 | |||||