Protein Alignment HERC2 and AT3G02300

DIOPT Version :10

• Sequence 1: NP_608388.2
• Gene: HERC2 / 33035
• FlyBaseID: FBgn0031107
• Length: 4912
• Species: Drosophila melanogaster
• Sequence 2: NP_001327030.1
• Gene: AT3G02300 / 821167
• AraportID: AT3G02300
• Length: 482
• Species: Arabidopsis thaliana
• Alignment Length: 530
• Identity: 143/530 - (26%)
• Similarity: 221/530 - (41%)
• Gaps: 134/530 - (25%)

  Fly  2979 APEQDLP--CTVMVWGLNDKEQLGGLKGSK-VKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKV 3040
            ||...:|  ..:.|||.|...|.|..:..| :::|      .:|.|                 ::
plant    22 APSVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIP------KQLPP-----------------EL 63

  Fly  3041 YACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKL 3105
            :.|..|.|.|.                        :.:..|.:|..|:..||.:|:||..|.|:|
plant    64 FGCPAGANSRW------------------------LDISCGREHTAAVASDGSLFAWGANEYGQL 104

  Fly  3106 GHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAIS---------SQGELYTWGLGEYGRLGHGD 3161
            |.|.......|:.|:.|:::.::.|:||:..:|||:         |...|:.||..:      |.
plant   105 GDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAEPRENDGTLSTSRLWVWGQNQ------GS 163

  Fly  3162 NTTQLKPKLVTAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGS-EGSDTPH 3223
            |.    |:|.:..  |...:.||:||:  |..:||:|:|.:.:||..:.|:||||.: ||...|.
plant   164 NL----PRLFSGAFPATTAIRQVSCGT--AHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPR 222

  Fly  3224 EI--------ERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH----GGDQHVRKPQP 3276
            .|        |....:.::|:.||...:.||:.||||:|||.|...:|||    .||:.: .|:.
plant   223 VINAYAKFLDEAPELVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKEL-IPRR 286

  Fly  3277 IGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG-------------NTFVNKKPAL 3328
            :.||.|..:..||.|.:|..|::..|.:||||....||.|.|             ...:...|.|
plant   287 VVGLDGVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVL 351

  Fly  3329 VIGLDAVFVNRVACGSSHSI---------AWGLPN-ASSDEEKRGPVPFSSTRD----------P 3373
            ||..|   |..||||.||::         .||..: ..:..||.....:.|..|          .
plant   352 VIPTD---VRLVACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVGQVRKLAA 413

  Fly  3374 LGGSSLGIYEAETMQTL--KQEAKPLNQSSLSE--SLALETPAARQAALGHVLRAMSILQARQLI 3434
            .||.|..:.:|.:::.|  .|.|..:|.|:.||  .:|....:...|.|...||       .||:
plant   414 GGGHSAVLTDAFSLKELCEFQLADSVNLSNASEIQDVAFRMGSEALARLCERLR-------EQLL 471

  Fly  3435 VAALTSHSKV 3444
            ....|:..:|
plant   472 DGDFTNGEEV 481

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HERC2	NP_608388.2	ATS1	625..>894	CDD:444065
		Cyt-b5	1292..1364	CDD:459698
		MIB_HERC2	1928..1988	CDD:461991
		UBA_HERC2	2515..2559	CDD:270585
		Cul7	2624..2699	CDD:463286
		APC10-HERC2	2762..2932	CDD:176485
		ATS1	2987..3320	CDD:444065	102/370 (28%)
		RCC1	3302..3350	CDD:395335	21/69 (30%)
		ATS1	4050..4389	CDD:444065
		HECTc	4509..4880	CDD:238033
AT3G02300	NP_001327030.1	ATS1	<32..115	CDD:444065	27/129 (21%)
		ATS1	76..423	CDD:444065	109/362 (30%)