Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005173422.1 | Gene: | rcbtb2 / 794652 | ZFINID: | ZDB-GENE-071016-3 | Length: | 527 | Species: | Danio rerio |
Alignment Length: | 332 | Identity: | 116/332 - (34%) |
---|---|---|---|
Similarity: | 167/332 - (50%) | Gaps: | 36/332 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 3062 PHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKK 3126
Fly 3127 IRDVACGSS-HSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLV-TALAGRRVVQVACGSRDA 3189
Fly 3190 QTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIER-LSGIGVVQIECGAQFSLALTRAGEVW 3253
Fly 3254 TWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3318
Fly 3319 NTFVNKKPALVIGLDAV-FVNRVACGSSHSIA----------WGLPNASSDEEKRGP-------V 3365
Fly 3366 PFSSTRD 3372 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | 7/25 (28%) | ||
RCC1 | 3091..3140 | CDD:278826 | 15/49 (31%) | ||
RCC1 | 3144..3194 | CDD:278826 | 23/50 (46%) | ||
RCC1 | 3197..3246 | CDD:278826 | 17/49 (35%) | ||
RCC1 | 3250..3298 | CDD:278826 | 17/47 (36%) | ||
RCC1 | 3302..3350 | CDD:278826 | 21/58 (36%) | ||
RCC1_2 | 4136..4166 | CDD:290274 | |||
RCC1 | 4154..4203 | CDD:278826 | |||
RCC1 | 4206..4257 | CDD:278826 | |||
RCC1 | 4260..4309 | CDD:278826 | |||
RCC1 | 4312..4360 | CDD:278826 | |||
RCC1 | 4364..4413 | CDD:278826 | |||
HECTc | 4509..4880 | CDD:238033 | |||
HECTc | 4553..4878 | CDD:214523 | |||
rcbtb2 | XP_005173422.1 | RCC1 | 40..89 | CDD:278826 | 15/48 (31%) |
RCC1 | 93..143 | CDD:278826 | 23/51 (45%) | ||
RCC1 | 146..196 | CDD:278826 | 17/49 (35%) | ||
RCC1 | 199..248 | CDD:278826 | 17/48 (35%) | ||
RCC1 | 251..299 | CDD:278826 | 20/48 (42%) | ||
BTB | 364..460 | CDD:279045 | |||
BTB | 371..463 | CDD:197585 | |||
SPOP_C_like | 463..521 | CDD:269810 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |