| Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_031752069.1 | Gene: | rpgr / 733454 | XenbaseID: | XB-GENE-982274 | Length: | 1225 | Species: | Xenopus tropicalis |
| Alignment Length: | 690 | Identity: | 160/690 - (23%) |
|---|---|---|---|
| Similarity: | 258/690 - (37%) | Gaps: | 191/690 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2990 VWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG 3054
Fly 3055 VTHNVPLPHQLPVL-RQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRL 3118
Fly 3119 VEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQ--LKPKLVTALAGRRVVQ 3181
Fly 3182 VACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLAL 3246
Fly 3247 TRAGEVWTWGKGDYYRLGHGG---DQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWG 3308
Fly 3309 DNDHGQQGSG-----NTFVNKKPALVIGLDAVFVNRVACGSSHSIAWGLP--------------- 3353
Fly 3354 --------NASSD----------------EEKRGPVPF---SSTRDPLGGSSL------------ 3379
Fly 3380 -----------GIYEAETMQTLKQEAKP---LNQSSLSESLALETPAARQAALGH--------VL 3422
Fly 3423 RAMSILQARQLIVAALTSHSKVNFKE-RGAVGGEEDHLIGGPIMGAPLQLAETIAQGGGEAPADA 3486
Fly 3487 TDAGLQEHSPEAAVDALTGGMSGGANTLP------------PLSAGPLSAF----QSLTGSLSMS 3535
Fly 3536 GSLSSSALPQHKHSRMSASAMSVMAATMTQQEEMLSHISH 3575 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
| RCC1 | 687..737 | CDD:278826 | |||
| RCC1 | 740..787 | CDD:278826 | |||
| RCC1 | 790..841 | CDD:278826 | |||
| RCC1_2 | 828..857 | CDD:290274 | |||
| Cyt-b5 | 1290..1363 | CDD:278597 | |||
| MIB_HERC2 | 1928..1987 | CDD:284184 | |||
| UBA_HERC2 | 2515..2559 | CDD:270585 | |||
| Cul7 | 2624..2699 | CDD:288381 | |||
| APC10-HERC2 | 2762..2932 | CDD:176485 | |||
| RCC1 | 3037..3088 | CDD:278826 | 14/51 (27%) | ||
| RCC1 | 3091..3140 | CDD:278826 | 19/48 (40%) | ||
| RCC1 | 3144..3194 | CDD:278826 | 20/51 (39%) | ||
| RCC1 | 3197..3246 | CDD:278826 | 0/48 (0%) | ||
| RCC1 | 3250..3298 | CDD:278826 | 15/50 (30%) | ||
| RCC1 | 3302..3350 | CDD:278826 | 19/52 (37%) | ||
| RCC1_2 | 4136..4166 | CDD:290274 | |||
| RCC1 | 4154..4203 | CDD:278826 | |||
| RCC1 | 4206..4257 | CDD:278826 | |||
| RCC1 | 4260..4309 | CDD:278826 | |||
| RCC1 | 4312..4360 | CDD:278826 | |||
| RCC1 | 4364..4413 | CDD:278826 | |||
| HECTc | 4509..4880 | CDD:238033 | |||
| HECTc | 4553..4878 | CDD:214523 | |||
| rpgr | XP_031752069.1 | ATS1 | <42..334 | CDD:227511 | 95/335 (28%) |
| RCC1 | 315..362 | CDD:395335 | 18/49 (37%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.010 | |||||