| Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001347539.1 | Gene: | Rcbtb1 / 71330 | MGIID: | 1918580 | Length: | 531 | Species: | Mus musculus |
| Alignment Length: | 364 | Identity: | 112/364 - (30%) |
|---|---|---|---|
| Similarity: | 174/364 - (47%) | Gaps: | 29/364 - (7%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 3008 KVPTFS----QTISRLRPIHIAGGS--KSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLP 3066
Fly 3067 VLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKP-RLVEALRAKKIRDV 3130
Fly 3131 ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVT-ALAGRRVVQVACGSRDAQTLAL 3194
Fly 3195 TEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGD 3259
Fly 3260 YYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALH----CLAVTDAGQVYAWGDNDHGQQGSGNT 3320
Fly 3321 FVNKKPALVIGLDAVFVNRVACGSSHSIAWGLPNASSDE 3359 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
| RCC1 | 687..737 | CDD:278826 | |||
| RCC1 | 740..787 | CDD:278826 | |||
| RCC1 | 790..841 | CDD:278826 | |||
| RCC1_2 | 828..857 | CDD:290274 | |||
| Cyt-b5 | 1290..1363 | CDD:278597 | |||
| MIB_HERC2 | 1928..1987 | CDD:284184 | |||
| UBA_HERC2 | 2515..2559 | CDD:270585 | |||
| Cul7 | 2624..2699 | CDD:288381 | |||
| APC10-HERC2 | 2762..2932 | CDD:176485 | |||
| RCC1 | 3037..3088 | CDD:278826 | 13/50 (26%) | ||
| RCC1 | 3091..3140 | CDD:278826 | 18/49 (37%) | ||
| RCC1 | 3144..3194 | CDD:278826 | 19/50 (38%) | ||
| RCC1 | 3197..3246 | CDD:278826 | 18/48 (38%) | ||
| RCC1 | 3250..3298 | CDD:278826 | 15/51 (29%) | ||
| RCC1 | 3302..3350 | CDD:278826 | 12/47 (26%) | ||
| RCC1_2 | 4136..4166 | CDD:290274 | |||
| RCC1 | 4154..4203 | CDD:278826 | |||
| RCC1 | 4206..4257 | CDD:278826 | |||
| RCC1 | 4260..4309 | CDD:278826 | |||
| RCC1 | 4312..4360 | CDD:278826 | |||
| RCC1 | 4364..4413 | CDD:278826 | |||
| HECTc | 4509..4880 | CDD:238033 | |||
| HECTc | 4553..4878 | CDD:214523 | |||
| Rcbtb1 | NP_001347539.1 | RCC1 1 | 40..91 | 13/52 (25%) | |
| ATS1 | 43..>316 | CDD:227511 | 96/284 (34%) | ||
| RCC1 2 | 93..145 | 19/51 (37%) | |||
| RCC1 3 | 147..198 | 20/52 (38%) | |||
| RCC1 4 | 199..250 | 20/50 (40%) | |||
| RCC1 5 | 252..302 | 16/52 (31%) | |||
| RCC1 6 | 304..356 | 14/59 (24%) | |||
| BTB_POZ_RCBTB1_CLLD7 | 350..466 | CDD:349662 | 0/3 (0%) | ||
| BACK_RCBTB1 | 466..531 | CDD:350603 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.820 | |||||