Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006520242.1 | Gene: | Ubr5 / 70790 | MGIID: | 1918040 | Length: | 2800 | Species: | Mus musculus |
Alignment Length: | 3024 | Identity: | 550/3024 - (18%) |
---|---|---|---|
Similarity: | 919/3024 - (30%) | Gaps: | 1118/3024 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 2362 GVLYRHQVALRRILKQRAPGSIYA---SPDEPDRSDAESQQPG-EQDQQLSSGSGQEPQLLIQCI 2422
Fly 2423 LLRATQASPVKACYSYMDLATAALNCIQSLATQAHQELSEGGGVPPNGRALSSPPQPTMVHGVPV 2487
Fly 2488 YNVARKE--------------QKPSEQVEQKSKWPAAA------------TDAQL---------- 2516
Fly 2517 -----------IGQIME--------MGFTRRTVELALKQLSLQAEIMPT-PE---QIVQWILEHP 2558
Fly 2559 DVCANTIEEDTLPLASSAS-----------SHDPEADSDNECPSSNSTTSSSTSSDTVEGQPMAV 2612
Fly 2613 SGPAPPVKFESRKDFQT--------ADLYALYVRGLVRPGMTVRCCR-----DFEEIKQGDMGTV 2664
Fly 2665 LI-----------------------VDTEGLHDLNVQVDWRNHGSTYWVCFVHIELVEAAQTHHQ 2706
Fly 2707 PRPPPIAVGARVRLRTSSLRYGMLCPLRLGRSQGSSAI---GVVSSV--RSKQLTVDFPDQPAWQ 2766
Fly 2767 GHINEVELVASQPTSATLPSLG---DSCSQMPPSDLIEDWSRCIRSLTVSSNEAAAKHLLNGSNQ 2828
Fly 2829 PWQSCSSGPCRHWIRLELHDRILVHSLTLKVSPEDHSHMPSLLEIRVGDCVDSLKEYTWIPVPAG 2893
Fly 2894 ASRVLLMQQVPTYYPW------VEVVVKQCQNNGIQCKIHGIKFVGRRQQPDLQHILANAQFLAS 2952
Fly 2953 EYSAGVGPGSTAG--------------------------AGAVSTSHEEAAAAPEQDLPCTVMVW 2991
Fly 2992 GLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKV-----YACGEGTNGRL 3051
Fly 3052 GLG---VTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL 3113
Fly 3114 DKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRR 3178
Fly 3179 VVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFS 3243
Fly 3244 LALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCL-AVTDAGQVYAW 3307
Fly 3308 GDNDHGQQGSGNTFVN-----KKPALVIG-----LDAVF-----------------------VNR 3339
Fly 3340 VACGSSHSIAWGLPNASSDEEKRGPVPFSS----------------------------------- 3369
Fly 3370 --TRDPLGGSS-LGIYEAETMQTLKQEAKPLNQSS----------------LSESLALE------ 3409
Fly 3410 --------TPAARQAALGHVLRAM-SILQARQLIVAALTSHSKVN-------------FKERGAV 3452
Fly 3453 GGEE-----DHLIGGPIMG-----APLQLAETIAQGGGEAPADATDAGLQEHSPEAAVDALTGGM 3507
Fly 3508 SGGANTLPPLSAGPLSAFQSLTGSLSMSGSLSSSALPQHKHSRMSASAMSVMAATMTQQEEMLSH 3572
Fly 3573 ISHCHGLDDFGGLLGE------------------------PEAKSLVELLKLAVCGRCGPPSTSQ 3613
Fly 3614 TIADTLISLGAGTPAVAAMLLETCITELEDLCTSRHCLGKLPKPVMQESSHPYVDNVN-----VT 3673
Fly 3674 --------GVVRIPGAEMLRLEFDSQCSTEKRNDPLVIMDGTGRVLAMRSGREFAHWAPEIRVLG 3730
Fly 3731 DELRWKFSSDSSVNG---------WGWRFWVHAIMPAATLGESGSDRAVLSQPSMALVMSLLDSR 3786
Fly 3787 LAPRQPSVLLR----------LASALAACSQLGALTTAQRIWSLRKLHAVLLLEQAPRPQDPSLS 3841
Fly 3842 TLLQPLIPELLRQYEY-EEPQVRGGIHLMHSDYFKTLAALACDMQ--LDAALPAT--------SS 3895
Fly 3896 SSSSSAAPGAISSTGDV----HKWAWFKRYCIAVRVAQSLIRR-----TELPRAFCLEVRKKFAE 3951
Fly 3952 MLPSSSSNSNANPGCQSPGASMLNSTTSLSSS---TVSNVSPPPGI------------------- 3994
Fly 3995 TGEQPDLHCHAHQLESTSTLL-----HEDHTLFQAPHDAQLLQWLNRRPDDWALSWGGASTIYGW 4054
Fly 4055 GHNH----RGQ----LGGLEGSRIKTPTPCEALSLL-RP--VQLAGGEQSLFAVTPDGKLFATGY 4108
Fly 4109 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWG------------ 4161
Fly 4162 -EGEDGKL----GHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA-----------SGHVL 4210
Fly 4211 TWGKGR-----YGRL-----------------GHGDSEDQLRPKLVEALLGYRAIDIACG---SG 4250
Fly 4251 DAQTL---------------CITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVE 4300
Fly 4301 CGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSG 4365
Fly 4366 -------EVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS-TSQLSERL 4422
Fly 4423 RPL-----PNPPLEYDLV---RDLAPEALHARLILLH-HFSELVCPCLAMLPISGDLSLGALKDV 4478
Fly 4479 LVYNIKEAAFRKVIQTTMVRDKQHG--PVIEL------NRIQVKRSRNRCNGLAGIDGMKSVFGQ 4535
Fly 4536 MVQKLPLLTQEALALPHRVWKVKFVGESVDDCGGGYSESIAEM-CDELQNG--SVPLLINTPNGR 4597
Fly 4598 G----EAGANRDCFLLDPTLSSVLQMNMFRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRP 4658
Fly 4659 TDLTEVD---RDYVAGLLCIRNMDDDPKLFTALELPFSTSSAR---GHEVPLSTRYTHI--SPRN 4715
Fly 4716 RAEYVRLALGFRLHEFDEQ-VKAVRDGMSKVIPVPLLSLFSAAELQAMVCGSPDIPLGLLKSVAT 4779
Fly 4780 YKGFDPSSA-----LVTWFWEVMEEFTNQERSLFLRFVWGRTRLPRTIADFRGRDFVLQVLEKNP 4839
Fly 4840 PDHFLPESYTCFFLLKMPRYSCKAVLLEKLKYAI 4873 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | 13/76 (17%) | ||
Cul7 | 2624..2699 | CDD:288381 | 16/110 (15%) | ||
APC10-HERC2 | 2762..2932 | CDD:176485 | 27/178 (15%) | ||
RCC1 | 3037..3088 | CDD:278826 | 14/58 (24%) | ||
RCC1 | 3091..3140 | CDD:278826 | 9/48 (19%) | ||
RCC1 | 3144..3194 | CDD:278826 | 7/49 (14%) | ||
RCC1 | 3197..3246 | CDD:278826 | 8/48 (17%) | ||
RCC1 | 3250..3298 | CDD:278826 | 10/48 (21%) | ||
RCC1 | 3302..3350 | CDD:278826 | 11/80 (14%) | ||
RCC1_2 | 4136..4166 | CDD:290274 | 8/42 (19%) | ||
RCC1 | 4154..4203 | CDD:278826 | 10/65 (15%) | ||
RCC1 | 4206..4257 | CDD:278826 | 13/90 (14%) | ||
RCC1 | 4260..4309 | CDD:278826 | 8/48 (17%) | ||
RCC1 | 4312..4360 | CDD:278826 | 5/47 (11%) | ||
RCC1 | 4364..4413 | CDD:278826 | 8/55 (15%) | ||
HECTc | 4509..4880 | CDD:238033 | 86/386 (22%) | ||
HECTc | 4553..4878 | CDD:214523 | 83/342 (24%) | ||
Ubr5 | XP_006520242.1 | CUE_UBR5 | 184..230 | CDD:270606 | |
ZnF_UBR1 | 1177..1244 | CDD:197698 | 16/94 (17%) | ||
PolyA | 2391..2454 | CDD:197769 | 14/67 (21%) | ||
HECTc | 2469..2797 | CDD:214523 | 86/390 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |