| Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001030025.1 | Gene: | RPGR / 6103 | HGNCID: | 10295 | Length: | 1152 | Species: | Homo sapiens |
| Alignment Length: | 627 | Identity: | 150/627 - (23%) |
|---|---|---|---|
| Similarity: | 243/627 - (38%) | Gaps: | 194/627 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2990 VWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHI---AGGSKSLFIVSQDGKVYACGEGTNGRL 3051
Fly 3052 GLGVTHNVPLPHQLPVL-RQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDK 3115
Fly 3116 PRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG-----HGDNTTQLKPKLVTALA 3175
Fly 3176 GRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGA 3240
Fly 3241 QFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVY 3305
Fly 3306 AWGDNDHGQQGSG-----NTFVNKKPALVIGLDAVFVNRVACGSSH------------------- 3346
Fly 3347 ------SIAWGLPNAS----------------SDEEKRGPVPFSSTR--DPLGGSSLG------- 3380
Fly 3381 ----------------IYEAETMQ---------TLKQEAKPLNQSSLSESLALETPAARQAALGH 3420
Fly 3421 VL------RAMSI----LQARQLIVAALTSHSKV-------------NFKERGAVGGEEDHLIGG 3462
Fly 3463 PIMGAPLQLAETIAQGGGEAP------ADATDAGLQEHSPEA 3498 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
| RCC1 | 687..737 | CDD:278826 | |||
| RCC1 | 740..787 | CDD:278826 | |||
| RCC1 | 790..841 | CDD:278826 | |||
| RCC1_2 | 828..857 | CDD:290274 | |||
| Cyt-b5 | 1290..1363 | CDD:278597 | |||
| MIB_HERC2 | 1928..1987 | CDD:284184 | |||
| UBA_HERC2 | 2515..2559 | CDD:270585 | |||
| Cul7 | 2624..2699 | CDD:288381 | |||
| APC10-HERC2 | 2762..2932 | CDD:176485 | |||
| RCC1 | 3037..3088 | CDD:278826 | 14/51 (27%) | ||
| RCC1 | 3091..3140 | CDD:278826 | 16/48 (33%) | ||
| RCC1 | 3144..3194 | CDD:278826 | 21/54 (39%) | ||
| RCC1 | 3197..3246 | CDD:278826 | 10/48 (21%) | ||
| RCC1 | 3250..3298 | CDD:278826 | 5/47 (11%) | ||
| RCC1 | 3302..3350 | CDD:278826 | 19/77 (25%) | ||
| RCC1_2 | 4136..4166 | CDD:290274 | |||
| RCC1 | 4154..4203 | CDD:278826 | |||
| RCC1 | 4206..4257 | CDD:278826 | |||
| RCC1 | 4260..4309 | CDD:278826 | |||
| RCC1 | 4312..4360 | CDD:278826 | |||
| RCC1 | 4364..4413 | CDD:278826 | |||
| HECTc | 4509..4880 | CDD:238033 | |||
| HECTc | 4553..4878 | CDD:214523 | |||
| RPGR | NP_001030025.1 | RCC1 | <38..312 | CDD:332518 | 84/318 (26%) |
| RCC1 | 314..360 | CDD:306840 | 17/48 (35%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.920 | |||||