Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001070627.2 | Gene: | hectd3 / 563189 | ZFINID: | ZDB-GENE-031118-179 | Length: | 854 | Species: | Danio rerio |
Alignment Length: | 1067 | Identity: | 253/1067 - (23%) |
---|---|---|---|
Similarity: | 400/1067 - (37%) | Gaps: | 336/1067 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 3918 FKRYCIAVRVAQSLIRRTE-LPRAFCL---EVRKKFAEMLPSSSSNSNANPGCQSPGASMLNSTT 3978
Fly 3979 S-----LSSSTVSNVSPPPG----ITGEQPDLHCHAHQL--ESTSTLLHEDHTLFQAPHDAQLLQ 4032
Fly 4033 WLNRRPDDWAL----SWGG--------ASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSL 4081
Fly 4082 LRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTL------------------- 4127
Fly 4128 ----------LGSLQHVFVKKVAVN------SGGKHCLALTTEGEVYAWGEGEDGKLG-HGNRMS 4175
Fly 4176 YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGY 4240
Fly 4241 RAIDIACGSGD--AQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKV---E 4300
Fly 4301 CGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSG 4365
Fly 4366 EVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTSQLSERLRPLPNPPL 4430
Fly 4431 EYDLVRDLAPEALHARLILLHHFSELVCPCLAMLPISGDLSLGALKDVLVYNIKE----AAFRKV 4491
Fly 4492 IQTTMVRDKQHGPVIELNRIQVKR---SRNRCNGLAGIDGMKSVFGQMVQKLPLLTQEALALPHR 4553
Fly 4554 -------VWKVKFVGESVDDCGGGYSESIAEMCDELQNGS------VPLLINTPN-GRGEAGANR 4604
Fly 4605 DCFLLDPTLSSVLQMNMFRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPT-DLTEVDRDY 4668
Fly 4669 VAGLLCIRNMDDDPKLFT-ALELPFSTSSARGHEVPL-------STRYTHISPRNRAEYVRLALG 4725
Fly 4726 FRLHEFDEQVKAVRDGMSKVIPVPLLSLFSAAELQAMVCGSPDIPLGLLKSVATYKGFDPSSALV 4790
Fly 4791 TWFWEVMEEFTNQERSLFLRFVWGRTRLPRTIADFRGRDFVLQVLEKNPPDHFLPESYTCFFLLK 4855
Fly 4856 MPRYSCKAVLLEKLKYAIHFCKSIDTD 4882 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | |||
RCC1 | 3091..3140 | CDD:278826 | |||
RCC1 | 3144..3194 | CDD:278826 | |||
RCC1 | 3197..3246 | CDD:278826 | |||
RCC1 | 3250..3298 | CDD:278826 | |||
RCC1 | 3302..3350 | CDD:278826 | |||
RCC1_2 | 4136..4166 | CDD:290274 | 10/35 (29%) | ||
RCC1 | 4154..4203 | CDD:278826 | 10/49 (20%) | ||
RCC1 | 4206..4257 | CDD:278826 | 8/52 (15%) | ||
RCC1 | 4260..4309 | CDD:278826 | 10/51 (20%) | ||
RCC1 | 4312..4360 | CDD:278826 | 7/47 (15%) | ||
RCC1 | 4364..4413 | CDD:278826 | 7/48 (15%) | ||
HECTc | 4509..4880 | CDD:238033 | 126/396 (32%) | ||
HECTc | 4553..4878 | CDD:214523 | 118/347 (34%) | ||
hectd3 | NP_001070627.2 | APC10-HECTD3 | 231..366 | CDD:176487 | 44/231 (19%) |
HECTc | 523..842 | CDD:214523 | 116/336 (35%) | ||
HECT | 561..838 | CDD:279026 | 100/294 (34%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |