Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017211386.1 | Gene: | herc5.1 / 559981 | ZFINID: | ZDB-GENE-090311-56 | Length: | 884 | Species: | Danio rerio |
Alignment Length: | 931 | Identity: | 216/931 - (23%) |
---|---|---|---|
Similarity: | 371/931 - (39%) | Gaps: | 190/931 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 4075 PCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGV----GGSDSWAIPTLLGSLQHVF 4135
Fly 4136 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHS 4200
Fly 4201 AAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDN-VW 4264
Fly 4265 SWGDGDYGKLGRGGSDGCKLPYKIESLAGLG----VVKVECGSQFSVAL-----------TKSGA 4314
Fly 4315 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIA---TGSLHCVACSDSGEVYT---WGDN 4373
Fly 4374 DEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTSQLSERLRPL--PNPPLEYDL-- 4434
Fly 4435 --------------------------VRDLAPEALHARLILLHHFSELVCPCLA-MLPISGDLSL 4472
Fly 4473 GALKDVLVYNIKEAAFRKVIQTTMVRDKQHGPVIELNRIQVKRS--------------------- 4516
Fly 4517 -----RNRCNGLAGIDGMKSVFGQMVQKLP----LLTQEALA--LPHRVWKVKF---VGES--VD 4565
Fly 4566 DC----GGG-------------YSESIAEMCD------------ELQNGSVPLLINTPNGRGEAG 4601
Fly 4602 ANRDCFLLDPTLSSVLQMNMFRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPT--DLTEV 4664
Fly 4665 DRDYVAGLLCIRNMDDDPKLFTALELPFSTSSARGHEVPL--STRYTHISPRNRAEYVRLALGFR 4727
Fly 4728 LHEFDEQVKAV----RDGMSKVIPVPLLSLFSAAELQAMVCGSPDIPLGLLKSVATYKG-FDPSS 4787
Fly 4788 ALVTWFWEVMEEFTNQERSLFLRFVWGRTRLPRTIADFRGRDFVLQVLEKNPPDHFLPESYTCFF 4852
Fly 4853 LLKMPRYSCKAVLLEKLKYAI 4873 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | |||
RCC1 | 3091..3140 | CDD:278826 | |||
RCC1 | 3144..3194 | CDD:278826 | |||
RCC1 | 3197..3246 | CDD:278826 | |||
RCC1 | 3250..3298 | CDD:278826 | |||
RCC1 | 3302..3350 | CDD:278826 | |||
RCC1_2 | 4136..4166 | CDD:290274 | 9/29 (31%) | ||
RCC1 | 4154..4203 | CDD:278826 | 16/48 (33%) | ||
RCC1 | 4206..4257 | CDD:278826 | 19/50 (38%) | ||
RCC1 | 4260..4309 | CDD:278826 | 11/53 (21%) | ||
RCC1 | 4312..4360 | CDD:278826 | 12/50 (24%) | ||
RCC1 | 4364..4413 | CDD:278826 | 9/51 (18%) | ||
HECTc | 4509..4880 | CDD:238033 | 97/440 (22%) | ||
HECTc | 4553..4878 | CDD:214523 | 88/364 (24%) | ||
herc5.1 | XP_017211386.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |