Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021324687.1 | Gene: | nedd4l / 559634 | ZFINID: | ZDB-GENE-051118-2 | Length: | 1279 | Species: | Danio rerio |
Alignment Length: | 1568 | Identity: | 324/1568 - (20%) |
---|---|---|---|
Similarity: | 525/1568 - (33%) | Gaps: | 511/1568 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 3508 SGGANTLPPLSAGPLSAFQSLTGSLSMSGSL---SSSALPQHKHSRMSASAMSVMAATMTQQEEM 3569
Fly 3570 LSHISHCHGLDDFGGLLGEPEAKSLVELLKLAVCGRCGPPSTSQTIADTLISLGAGTPAVAAMLL 3634
Fly 3635 ETCITELEDLCTSRHCLGKLPKPVM-QESSHPYVDNVNVTGVVRIPGAEMLRL----EFDSQC-- 3692
Fly 3693 --STEKRNDPLVIMDGTGRVLAMR--SGRE-FAHWAPE-IRVLGDELRWKFSSDSSV-------- 3743
Fly 3744 -----NGWGWRFWVHAIMPAATLGESGSDRAVLS-------QPSMALVMSLLD--------SRLA 3788
Fly 3789 PRQPSVLLRLASALAACSQLGALTTAQRIWSLRKLHA-------------------VLLLEQAPR 3834
Fly 3835 PQDPSL----------STLLQPLIPELLRQYEYEEPQVRGGIHLMHSDYFKTLAALACDM--QLD 3887
Fly 3888 AALPATSSSSSSSAAPGAISSTGDVHKWAWFKRYCIAVRVAQSLIRRTELPRAFCLEVRKKFAEM 3952
Fly 3953 LPSSSSNSNANPGC--QSPGASMLNSTTSLSSSTVSNVSP-PPGITGEQPDLHCHAHQLESTSTL 4014
Fly 4015 LHEDHT-----------LFQAPHDAQLLQ--------WLNRRP---------------DDWALSW 4045
Fly 4046 GGAS----TIYGWGHNHRGQLGG---LEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPD--- 4100
Fly 4101 ---GKLFATGYGSGGRLGV-----GGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCL------AL 4151
Fly 4152 TTEGEVYAWGEGEDGK-----LGHGNR-MSYDRPKLVEHL-NGMSVADIACGSAHSAA------I 4203
Fly 4204 TASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDAQTLC--ITDDDNVWS 4265
Fly 4266 WGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYT-----W------- 4318
Fly 4319 GKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTV 4383
Fly 4384 TAIQRPRLVAALQGKHIVKVTCGSAHTLALSTSQLSERLRPLPNPPLEYDLVRDLAP---EALHA 4445
Fly 4446 --RLILLHHFSE--------LVCPCLA--MLPISGDLSLGALKDVLVYNIKEAAFRKVIQTTMVR 4498
Fly 4499 DKQHGPVIELNRIQVKRSRNRCNGLAGIDGMKSVFGQMVQKLPLLTQEALALPHRVWKVKFVGES 4563
Fly 4564 VDDCGGGYSESIAEMCDELQN-----------GSVPLLINTPNGRGEAGANRDCFLLDPTLSSVL 4617
Fly 4618 QMNMFRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPTDLTEVDRDYVAGLLCIRNMDDDP 4682
Fly 4683 KLFTALELPF---STSSARGHEVPLSTRYTH--ISPRNRAEYVRLALGFR-LHEFDEQVKAVRDG 4741
Fly 4742 MSKVIPVPLLSLFSAAELQAMVCGSPDIPLGLLKSVATYK-GFDPSSALVTWFWEVMEEFTNQER 4805
Fly 4806 SLFLRFVWGRTRLPRT-IADFRGRD----FVLQVLEKNPPDHFLPESYTCFFLLKMPRYSCKAVL 4865
Fly 4866 LEKLKYAI 4873 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | |||
RCC1 | 3091..3140 | CDD:278826 | |||
RCC1 | 3144..3194 | CDD:278826 | |||
RCC1 | 3197..3246 | CDD:278826 | |||
RCC1 | 3250..3298 | CDD:278826 | |||
RCC1 | 3302..3350 | CDD:278826 | |||
RCC1_2 | 4136..4166 | CDD:290274 | 9/35 (26%) | ||
RCC1 | 4154..4203 | CDD:278826 | 18/61 (30%) | ||
RCC1 | 4206..4257 | CDD:278826 | 11/53 (21%) | ||
RCC1 | 4260..4309 | CDD:278826 | 7/48 (15%) | ||
RCC1 | 4312..4360 | CDD:278826 | 6/59 (10%) | ||
RCC1 | 4364..4413 | CDD:278826 | 7/48 (15%) | ||
HECTc | 4509..4880 | CDD:238033 | 97/388 (25%) | ||
HECTc | 4553..4878 | CDD:214523 | 89/344 (26%) | ||
nedd4l | XP_021324687.1 | C2 | <374..430 | CDD:326325 | 12/78 (15%) |
WW | 473..499 | CDD:306827 | 7/32 (22%) | ||
WW | 669..698 | CDD:306827 | 7/28 (25%) | ||
WW | 798..829 | CDD:197736 | 9/83 (11%) | ||
WW | 856..885 | CDD:238122 | 6/28 (21%) | ||
HECTc | 946..1275 | CDD:214523 | 90/350 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |