| Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001108154.1 | Gene: | ube3b / 556864 | ZFINID: | ZDB-GENE-060526-231 | Length: | 1069 | Species: | Danio rerio |
| Alignment Length: | 502 | Identity: | 127/502 - (25%) |
|---|---|---|---|
| Similarity: | 211/502 - (42%) | Gaps: | 111/502 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 4429 PLEYDLVRDLAPEALHARLILLHHFSELVCPCLAMLPISG----DLSLGALKDVLVYNIKEAAFR 4489
Fly 4490 KVIQTTMVRDKQHGPVIE-------LNRIQVKRSRNRCNGLAGIDGMKSVFGQMVQKLPLLTQEA 4547
Fly 4548 LALPHRVWKVKFVGE-SVDDCG----GGYSESIAEMCDELQNGSVPLLINTPNGRGEAGANRDCF 4607
Fly 4608 LLDPTLSSVLQMN---MFRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGE-----VLRPTDLTEV 4664
Fly 4665 DRDYVAGLLCIRNMDDDPKLFTALELPFS-TSSARG----HEVPLSTRYTHISPRNRAEYVRLAL 4724
Fly 4725 GFRLH-EFDEQVKAVRDGMSKVIPVPLLSLFSAAELQAMVCG-SPDIPL-GLLKSVATYKGFDPS 4786
Fly 4787 SALVTWFWEVM-EEFTNQERSLFLRFVWGRTRLP---------------------RTIADFRG-- 4827
Fly 4828 -RDFVLQVLEKNPPDHFLPESYTCFFLLKMPRYSCKAVLLEKLKYAI 4873 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
| RCC1 | 687..737 | CDD:278826 | |||
| RCC1 | 740..787 | CDD:278826 | |||
| RCC1 | 790..841 | CDD:278826 | |||
| RCC1_2 | 828..857 | CDD:290274 | |||
| Cyt-b5 | 1290..1363 | CDD:278597 | |||
| MIB_HERC2 | 1928..1987 | CDD:284184 | |||
| UBA_HERC2 | 2515..2559 | CDD:270585 | |||
| Cul7 | 2624..2699 | CDD:288381 | |||
| APC10-HERC2 | 2762..2932 | CDD:176485 | |||
| RCC1 | 3037..3088 | CDD:278826 | |||
| RCC1 | 3091..3140 | CDD:278826 | |||
| RCC1 | 3144..3194 | CDD:278826 | |||
| RCC1 | 3197..3246 | CDD:278826 | |||
| RCC1 | 3250..3298 | CDD:278826 | |||
| RCC1 | 3302..3350 | CDD:278826 | |||
| RCC1_2 | 4136..4166 | CDD:290274 | |||
| RCC1 | 4154..4203 | CDD:278826 | |||
| RCC1 | 4206..4257 | CDD:278826 | |||
| RCC1 | 4260..4309 | CDD:278826 | |||
| RCC1 | 4312..4360 | CDD:278826 | |||
| RCC1 | 4364..4413 | CDD:278826 | |||
| HECTc | 4509..4880 | CDD:238033 | 110/411 (27%) | ||
| HECTc | 4553..4878 | CDD:214523 | 103/367 (28%) | ||
| ube3b | NP_001108154.1 | IQ | 28..50 | CDD:197470 | |
| HECTc | 683..1067 | CDD:238033 | 110/410 (27%) | ||
| HECTc | 708..1066 | CDD:214523 | 103/374 (28%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||