Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001007510.1 | Gene: | rcc1l / 493236 | XenbaseID: | XB-GENE-963910 | Length: | 449 | Species: | Xenopus tropicalis |
Alignment Length: | 504 | Identity: | 115/504 - (22%) |
---|---|---|---|
Similarity: | 178/504 - (35%) | Gaps: | 157/504 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 4001 LHCHAHQLESTSTLLHEDHTLFQAPHDAQLLQWLNRRPDDWALSWGGASTIYGWGHNHRGQLGGL 4065
Fly 4066 EGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP-----DGKL--FATGYGSGGRLGVGGSDSWA 4123
Fly 4124 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEG--EDGKLGHGNRMSYDRPKLVEHL- 4185
Fly 4186 ------------NGMSVADIACGSAHSAAITASGHVLTWGKGRYGRL------GHGDSEDQLRPK 4232
Fly 4233 LVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI-ESLAGLGV 4296
Fly 4297 VKVECGSQFSVALTKSGAVYTWGKGDFHRLG------------HGSVDHVRRPKKVA-------- 4341
Fly 4342 ------------ALQGK---------------------------KIISIATGSLHCVACSDSGEV 4367
Fly 4368 YTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4416 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | |||
RCC1 | 3091..3140 | CDD:278826 | |||
RCC1 | 3144..3194 | CDD:278826 | |||
RCC1 | 3197..3246 | CDD:278826 | |||
RCC1 | 3250..3298 | CDD:278826 | |||
RCC1 | 3302..3350 | CDD:278826 | |||
RCC1_2 | 4136..4166 | CDD:290274 | 4/31 (13%) | ||
RCC1 | 4154..4203 | CDD:278826 | 16/63 (25%) | ||
RCC1 | 4206..4257 | CDD:278826 | 16/56 (29%) | ||
RCC1 | 4260..4309 | CDD:278826 | 14/49 (29%) | ||
RCC1 | 4312..4360 | CDD:278826 | 15/106 (14%) | ||
RCC1 | 4364..4413 | CDD:278826 | 17/48 (35%) | ||
HECTc | 4509..4880 | CDD:238033 | |||
HECTc | 4553..4878 | CDD:214523 | |||
rcc1l | NP_001007510.1 | RCC1 | <51..374 | CDD:332518 | 85/378 (22%) |
RCC1_2 | 381..410 | CDD:316098 | 8/28 (29%) | ||
RCC1 | 398..444 | CDD:306840 | 17/47 (36%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |