| Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001287262.1 | Gene: | hyd / 41181 | FlyBaseID: | FBgn0002431 | Length: | 2887 | Species: | Drosophila melanogaster |
| Alignment Length: | 1198 | Identity: | 245/1198 - (20%) |
|---|---|---|---|
| Similarity: | 404/1198 - (33%) | Gaps: | 372/1198 - (31%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 3859 EPQVRGGIHLM------HSDYFKTLAALACDMQLDAALPATSSSSSSSAAPGAISSTGDVHKWAW 3917
Fly 3918 FKRYCIAVRVAQSLIRRTELP--------------RAFCLEVRKK--FAEMLPSSSSN-SNANPG 3965
Fly 3966 CQS-------PGASMLNSTTSLSSSTVSNVSPPPGITGEQPDLHCHAHQLESTSTLLHEDHTL-F 4022
Fly 4023 QAPHDAQLLQWLNRRPDDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQL 4087
Fly 4088 AGGEQSLFAVTPDGKLFATGYGSGGRL--GVGGSDSWAIPTLLG---SL---QHVFVKKVAVNSG 4144
Fly 4145 GKHCLALTTEGEVYAWGEG-------------------EDGKLGHGNRMSYDRPKLVEHLNGMSV 4190
Fly 4191 ADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEA--------LLGYRAIDIAC 4247
Fly 4248 GSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQF------- 4305
Fly 4306 -----------SVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKK-IISIATGSLH- 4357
Fly 4358 CVACS-----DSGEVYTWGD-------------------------NDEGQLGDGTV----TAIQR 4388
Fly 4389 PRLVAAL------------QGKHIV--------KVTCGSAHTLAL-----STSQL---SERLRPL 4425
Fly 4426 PN-------PPLEYDLVRDLAPEALHARL-ILLHHFSELVCPCLAMLPISGDLSLGALKDVLVYN 4482
Fly 4483 IKEAAFRKVIQTTMVRDKQHGPVIELNRIQVKRSRNRCNGLAGIDGMKSVFGQMVQKLPLLTQEA 4547
Fly 4548 LALPHRVWKVKFVGESVDDCGGGYSESIAE-----------MCDELQNGSVPLLINTPNGRGEAG 4601
Fly 4602 ANRDCFLLDPT--LSSVLQMNMFRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPTDLTEV 4664
Fly 4665 DRD-YVAGLLCIRNMD--DDPKLFTALELPF-----STSSARGHEVPLSTRYTHISPRNRAEYVR 4721
Fly 4722 LALGFRLHEFDEQ-VKAVRDGMSKVIPVPLLSLFSAAELQAMVCGSPDIPLGLLKSVATY----- 4780
Fly 4781 KGFDPSSALVTWFWEVMEEFTNQERSLFLRFVWGRTRLPRTIADFRGRDFVLQVLEKNPPDHFLP 4845
Fly 4846 ESYTCFFLLKMPRYSCKAVLLEKLKYAI 4873 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
| RCC1 | 687..737 | CDD:278826 | |||
| RCC1 | 740..787 | CDD:278826 | |||
| RCC1 | 790..841 | CDD:278826 | |||
| RCC1_2 | 828..857 | CDD:290274 | |||
| Cyt-b5 | 1290..1363 | CDD:278597 | |||
| MIB_HERC2 | 1928..1987 | CDD:284184 | |||
| UBA_HERC2 | 2515..2559 | CDD:270585 | |||
| Cul7 | 2624..2699 | CDD:288381 | |||
| APC10-HERC2 | 2762..2932 | CDD:176485 | |||
| RCC1 | 3037..3088 | CDD:278826 | |||
| RCC1 | 3091..3140 | CDD:278826 | |||
| RCC1 | 3144..3194 | CDD:278826 | |||
| RCC1 | 3197..3246 | CDD:278826 | |||
| RCC1 | 3250..3298 | CDD:278826 | |||
| RCC1 | 3302..3350 | CDD:278826 | |||
| RCC1_2 | 4136..4166 | CDD:290274 | 7/48 (15%) | ||
| RCC1 | 4154..4203 | CDD:278826 | 11/67 (16%) | ||
| RCC1 | 4206..4257 | CDD:278826 | 6/58 (10%) | ||
| RCC1 | 4260..4309 | CDD:278826 | 11/66 (17%) | ||
| RCC1 | 4312..4360 | CDD:278826 | 10/49 (20%) | ||
| RCC1 | 4364..4413 | CDD:278826 | 15/97 (15%) | ||
| HECTc | 4509..4880 | CDD:238033 | 88/392 (22%) | ||
| HECTc | 4553..4878 | CDD:214523 | 84/348 (24%) | ||
| hyd | NP_001287262.1 | E3_UbLigase_EDD | 150..196 | CDD:288409 | |
| ZnF_UBR1 | 1217..1284 | CDD:197698 | |||
| ASF1_hist_chap | 1535..1733 | CDD:304562 | |||
| PolyA | 2498..2561 | CDD:197769 | 12/110 (11%) | ||
| HECTc | 2589..2885 | CDD:238033 | 78/304 (26%) | ||
| HECTc | 2589..2884 | CDD:214523 | 78/304 (26%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C45446994 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.830 | |||||