Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001189170.1 | Gene: | ctrip / 40596 | FlyBaseID: | FBgn0260794 | Length: | 3140 | Species: | Drosophila melanogaster |
Alignment Length: | 3814 | Identity: | 701/3814 - (18%) |
---|---|---|---|
Similarity: | 1133/3814 - (29%) | Gaps: | 1380/3814 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 1634 RRLLQELRSSRQPAKPEDLLNASIQQEQEKKPQSMPKQELEEQEE---------------EETLL 1683
Fly 1684 RRLNERQIHGEGELDPALMQDIVDFALQDSCDVETARRAM-YCQMQRYQLRLAGLQIVQQLLELH 1747
Fly 1748 GLLDAAQYSLL------NGFLGLHL-KSTSSGGGSTGS-------GSSLHVLGQL-NMISAYQKA 1797
Fly 1798 RLLLAQSRVLDWAVRELRRLVNQEQQ------------GHARGKDSTNLGTYVLLKRLPRARFLL 1850
Fly 1851 SVFGLLAKELGPNELGFLINSGLLGT----VLGLLAQTGGEGATGGQVHGELSILYEDSVLKQKS 1911
Fly 1912 SKAQLSG-PDLAKLMKIGTRIVRGADWKWGDQDGNPPGEGRIISEVGEDGWVRVEWYTGATNSYR 1975
Fly 1976 MGKEGQYDLQL--------ADSALNVASPTEPEREDVSGSE----------------------AS 2010
Fly 2011 PTSDSHPSKLLRHCAAKLLQILAVGTGLHGAQLDKDALRGMTSMFRTIIYP----------KPSM 2065
Fly 2066 SN-----ISYALGWLNLGFIRAISGDCPRL-CLELSTPGWLSHYLSLLE-----QPAGNEAGVYR 2119
Fly 2120 QLHCLRLLQLILAQWGAEEEPRMPALVHQLFATLGRIALHCPGDASLLPTAEGKARVLLTASHSG 2184
Fly 2185 SVAEELVALLRRLHTLPSWNPVINSFLAQKLCVAAELLAEQSHSTALDSEQVFVLGVLGAMGGHD 2249
Fly 2250 LRPRVGLHCFHEGSHMVIASFTPKGRCLLAPGGVGSGVGFVKVQLPAVMPHLDHTVFSLSRLPMN 2314
Fly 2315 EMLLNAWTVLLYGPAPEL----------RELPSSADGRLDLALLRAQQLQMAVLHTNGVLYRHQ- 2368
Fly 2369 ---VALRRILKQRAPGSIYASPDEPDRSDAESQQPGEQDQQLSSGSGQEPQLLIQCILLRATQAS 2430
Fly 2431 PVKACYSYMDL----ATAALNCIQSL----------------------------ATQAHQELSEG 2463
Fly 2464 GGVPPNGRALSSPPQPTMVHGVPVYNVARKEQKPSEQVEQ--KSKWPAAATDAQLI--------- 2517
Fly 2518 ------GQIMEMGFTRRTVELALKQLSLQAEI-------------MPTPEQIVQWILEHPDVCAN 2563
Fly 2564 TIEEDTLPLASSASSHDPEADSDNECPSSNSTTSSSTSSDTVEGQPMAVSGPAPPVKFESRKDFQ 2628
Fly 2629 TADLYALYVRGLVRPGMTVRCCRDFEEIKQGDMGTVLIVDTEGLHDLNVQVDWRNHGSTYWVCFV 2693
Fly 2694 HIELVEAAQTHHQPRPPPI--AVGARVRLRTSSLRYGMLCPLRLGRSQGSSAIGVVSSVRSKQLT 2756
Fly 2757 VDFPDQPAWQGHINEVELVASQPTSATLPSLGDSCSQMPPSDLIEDWSRCIRSLTVSSNEAAAKH 2821
Fly 2822 LLNGSNQPWQSCSSGPCRHWIRLELHDRILVHSLTLKVSPEDHSHMPSLLE-IRVGDCVDSLKE- 2884
Fly 2885 -----YTWIPVPAGASRVLLMQQVPTYYPWVEVVVKQCQNNGIQCKIHGIKFVGRRQQP------ 2938
Fly 2939 ---------DLQHILANAQFLASEYSAGVGPGSTAGAGAVSTSHEEAAAAPEQDLPCTVMVWGLN 2994
Fly 2995 DKEQLGGLKGSKVK-VPTFSQTISRLRPI---HIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV 3055
Fly 3056 THNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVE 3120
Fly 3121 ALRAKKIRDVACGSSHSAAIS-SQGELY--TWGLGEYGRLGHGDNTTQLKPKL-------VTALA 3175
Fly 3176 GRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGA 3240
Fly 3241 QFS---LALTRAGEVWTWGKGDYYRLGHGGDQHVRK----PQPIGGLRGRRVIHVAVGALHC--- 3295
Fly 3296 LAVTDAGQVYAWG--------------DNDHGQQGSGNTF----VNKKPALVIGLDAVFVNRVAC 3342
Fly 3343 GSSHSIAWGLPNASSDEEKRGPVP-------------FSSTRDP------LGGSSLGIYEAETMQ 3388
Fly 3389 TLKQEAK-PLNQSSLSESLALETPAARQAALGHVLR-AMSILQARQLIVAALTSHSKVNFKERGA 3451
Fly 3452 V------GGEEDHLIGGPIMGAPLQLAET---IAQGGG--EAPADATD-----------AGL--- 3491
Fly 3492 ---------QEHSPEA---AVDALTGGMSGGANTLPPLSAGPLSAFQSLTGSLSMSGSLSSSALP 3544
Fly 3545 QHKHSRMSASAMSVMAATMTQQEEMLSHISHCHGLDDFGGLLGEPEAKSLVELLKLAVCGRCGPP 3609
Fly 3610 STSQTIADTLISLGAGTPAVAAMLLETCITELEDLCTSRHCLGKLPKPVMQESSHPYVDNVNVTG 3674
Fly 3675 VVRIPGAEMLRLEFDSQCST-----------EKRNDPLVIMDGTGRVLAMRSGREFAHWAPEIRV 3728
Fly 3729 LGDELRWKFSSDSSVNGWGWRFWVHAIMPAAT-LGESGSDRAVLSQPSMALVMSLLDSRLAPRQP 3792
Fly 3793 SVLLRLASALAACSQLGALTTAQRIWSLRKLHAVLLLEQAPRPQDPSLSTLLQPLIPELLRQYEY 3857
Fly 3858 EEPQVRGGIHLMHSDYFKTLAALACDMQLDAALPATSSSSSSSAA-----PGAISSTGDVHKWAW 3917
Fly 3918 FKRYCIAVRVAQSLI-----------RRTELPRAFCLEVRKKFAEMLPSSSSNSNANPGCQSPGA 3971
Fly 3972 SM-LNST--TSLSSSTVSNV-----SPPPGITGEQPDLHCHAHQLESTSTLLHEDHTLFQAPHDA 4028
Fly 4029 QLLQWLNRRPDDWALSWGGASTIYGWGH-----------NHRGQLGGLE----GSRIKTPTPCEA 4078
Fly 4079 LSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQ-HVFVKKVAVN 4142
Fly 4143 SGGK---HCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSA---HSA 4201
Fly 4202 AITASGHVLTWGKGRYGRLGHGD---SEDQLRPKLVEALLG------------YRAID------I 4245
Fly 4246 ACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALT 4310
Fly 4311 KSGAVYTWGKGDFHRLGHGSVDHVRR-----------PKKVAALQ-------GKKIISIATGSL- 4356
Fly 4357 ----------------HCVACSDSGEVYTWGD--------NDEGQLGDGTV-------------- 4383
Fly 4384 ------------------------TAIQR-----PRLVAA-----------------------LQ 4396
Fly 4397 GKHIVKVTCGSAHTLALSTSQLSERLRPLPNPPLE-YDLV------RDLA--------------- 4439
Fly 4440 PEALHARLILLHHFSELVCPCLAMLPISGDLSLGALKDVLV-----YNIKEAAFRKVIQ------ 4493
Fly 4494 TTMVRDKQHGPVIELNRIQVKRS--------RNRCNGLAGIDGMKSVFGQMVQKLPLLTQEALAL 4550
Fly 4551 PHRVWKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLSS 4615
Fly 4616 VL-QMN----MFRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGE-------------------VL 4656
Fly 4657 RPTDLTEVDRDYVAGLLCIRNMDDDPKL---------FTALELPFSTSSARGHEVPLSTRYTHIS 4712
Fly 4713 PRNRAEYVRL-ALGFRLHEFDEQVKAVRDGMSKVIPVPLLSLFSAAELQAMVCGSP--------D 4768
Fly 4769 IPLGLLKSVATYKGFDPSSALVTWFWEVMEEFTNQERSLFLRFVWGRTRLPRTIADFRG----RD 4829
Fly 4830 FVLQVLEKNP-PDHFLPESYTCFFLLKMPRYSCKAVLLEKLKYA 4872 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | 13/66 (20%) | ||
UBA_HERC2 | 2515..2559 | CDD:270585 | 6/71 (8%) | ||
Cul7 | 2624..2699 | CDD:288381 | 6/74 (8%) | ||
APC10-HERC2 | 2762..2932 | CDD:176485 | 23/176 (13%) | ||
RCC1 | 3037..3088 | CDD:278826 | 6/50 (12%) | ||
RCC1 | 3091..3140 | CDD:278826 | 6/48 (13%) | ||
RCC1 | 3144..3194 | CDD:278826 | 12/58 (21%) | ||
RCC1 | 3197..3246 | CDD:278826 | 11/51 (22%) | ||
RCC1 | 3250..3298 | CDD:278826 | 10/54 (19%) | ||
RCC1 | 3302..3350 | CDD:278826 | 14/65 (22%) | ||
RCC1_2 | 4136..4166 | CDD:290274 | 7/32 (22%) | ||
RCC1 | 4154..4203 | CDD:278826 | 10/51 (20%) | ||
RCC1 | 4206..4257 | CDD:278826 | 14/71 (20%) | ||
RCC1 | 4260..4309 | CDD:278826 | 6/48 (13%) | ||
RCC1 | 4312..4360 | CDD:278826 | 13/82 (16%) | ||
RCC1 | 4364..4413 | CDD:278826 | 16/122 (13%) | ||
HECTc | 4509..4880 | CDD:238033 | 100/419 (24%) | ||
HECTc | 4553..4878 | CDD:214523 | 91/367 (25%) | ||
ctrip | NP_001189170.1 | Extensin_2 | <688..731 | CDD:252669 | 10/46 (22%) |
WWE | 1409..1481 | CDD:128922 | 19/98 (19%) | ||
FAM199X | <1985..2074 | CDD:292442 | 17/108 (16%) | ||
HECTc | <2818..3138 | CDD:294058 | 86/316 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |