DRSC/TRiP Functional Genomics Resources

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Protein Alignment HERC2 and ctrip

DIOPT Version :9

Sequence 1:NP_608388.2 Gene:HERC2 / 33035 FlyBaseID:FBgn0031107 Length:4912 Species:Drosophila melanogaster
Sequence 2:NP_001189170.1 Gene:ctrip / 40596 FlyBaseID:FBgn0260794 Length:3140 Species:Drosophila melanogaster


Alignment Length:3814 Identity:701/3814 - (18%)
Similarity:1133/3814 - (29%) Gaps:1380/3814 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1634 RRLLQELRSSRQPAKPEDLLNASIQQEQEKKPQSMPKQELEEQEE---------------EETLL 1683
            :|.:..:||...||    ..:..:..:|...|.|. |::|.:...               ::.:.
  Fly   121 KRSVGAIRSPSSPA----FNSIPVVSDQSLSPGSR-KRQLNQHNNSNNKASSSHQSAPGGDQLVC 180

  Fly  1684 RRLNERQIHGEGELDPALMQDIVDFALQDSCDVETARRAM-YCQMQRYQLRLAGLQIVQQLLELH 1747
            ..|.:|::  :..|...:.:..|:..|..:....|.|:|. .|..||.:.:    .|..:.|...
  Fly   181 APLKKRRL--QQSLGSGICEGAVEINLGAASFDHTPRQASGDCVAQRTRSK----TISPEELPST 239

  Fly  1748 GLLDAAQYSLL------NGFLGLHL-KSTSSGGGSTGS-------GSSLHVLGQL-NMISAYQKA 1797
            ....||::..:      ..|...|. |..:|.|||..:       |::....|:. |:::.|:|.
  Fly   240 SSAAAARHHQIRPSASSTSFSSSHRNKRKASIGGSIAAVETTPHRGTAAARAGRSGNLLNYYRKT 304

  Fly  1798 RLLLAQSRVLDWAVRELRRLVNQEQQ------------GHARGKDSTNLGTYVLLKRLPRARFLL 1850
            |           .|...|.....|:|            |.|....|:..|.      :|:.|   
  Fly   305 R-----------KVSHTRSSQKSEKQSIPAEDTTANRNGSAGSGSSSKSGV------IPKNR--- 349

  Fly  1851 SVFGLLAKELGPNELGFLINSGLLGT----VLGLLAQTGGEGATGGQVHGELSILYEDSVLKQKS 1911
                   |.|..::      ..||.|    |....|:||||..:   .||.|.::.:....:...
  Fly   350 -------KSLRHSQ------QNLLDTEAAEVESAAAETGGEQQS---EHGNLDVIDQLPTPEAGP 398

  Fly  1912 SKAQLSG-PDLAKLMKIGTRIVRGADWKWGDQDGNPPGEGRIISEVGEDGWVRVEWYTGATNSYR 1975
            ::::.|| .:.::|......:|:..|    |::.:...|.....|||         :.|..||  
  Fly   399 NQSEASGIHNQSQLEADRQPVVQDED----DEEDDEEEEEEEEEEVG---------FYGIVNS-- 448

  Fly  1976 MGKEGQYDLQL--------ADSALNVASPTEPEREDVSGSE----------------------AS 2010
            .|...:.|.|:        .:..::.....|.|.||:|.||                      |.
  Fly   449 AGSSYEEDTQIVAEEDEITTEEEVDDEDDDEIEEEDLSESEFAQQLIGELGGERQQPQRATNNAK 513

  Fly  2011 PTSDSHPSKLLRHCAAKLLQILAVGTGLHGAQLDKDALRGMTSMFRTIIYP----------KPSM 2065
            .|.::.|:.    .||..::.....|...|.| .:.|..|..:.      |          :.|.
  Fly   514 KTKNNTPAV----AAASTIKATTTATTSSGYQ-QRAAPHGQGAA------PGAGGGGPRATRSSN 567

  Fly  2066 SN-----ISYALGWLNLGFIRAISGDCPRL-CLELSTPGWLSHYLSLLE-----QPAGNEAGVYR 2119
            ||     :.|::              .|.| .:..:||    |.|:..:     ||....:...:
  Fly   568 SNSSNNVVDYSI--------------MPHLTTVATTTP----HALTPQQHQQQRQPPQPPSHQQQ 614

  Fly  2120 QLHCLRLLQLILAQWGAEEEPRMPALVHQLFATLGRIALHCPGDASLLPTAEGKARVLLTASHSG 2184
            |:|             .:::|......|| ||.|         .:.:.|||...|..  .|:|  
  Fly   615 QVH-------------QQQQPPQLLPTHQ-FAHL---------SSFVTPTAAAAAAA--AAAH-- 652

  Fly  2185 SVAEELVALLRRLHTLPSWNPVINSFLAQKLCVAAELLAEQSHSTALDSEQVFVLGVLGAMGGHD 2249
                              :.|.         ..||...|:|.|                    |.
  Fly   653 ------------------YPPA---------SAAAAYFAQQQH--------------------HQ 670

  Fly  2250 LRPRVGLHCFHEGSHMVIASFTPKGRCLLAPGGVGSGVGFVKVQLPAVMPHLDHTVFSLSRLPMN 2314
            .:.:      |:..|:                          .|..|..||..|:..::...|..
  Fly   671 HQHQ------HQQQHV--------------------------QQAQAPQPHYYHSSVAVLHQPPP 703

  Fly  2315 EMLLNAWTVLLYGPAPEL----------RELPSSADGRLDLALLRAQQLQMAVLHTNGVLYRHQ- 2368
                :.:|....||.|.|          |..|::|.........:.||          |:|..| 
  Fly   704 ----HHFTSTGAGPPPALFQQQAPPQLTRYTPATATTAATFVPPQQQQ----------VVYNPQQ 754

  Fly  2369 ---VALRRILKQRAPGSIYASPDEPDRSDAESQQPGEQDQQLSSGSGQEPQLLIQCILLRATQAS 2430
               .:|||..:.:. ||..:|     .:.|:.||..:|.|..|:.:..:.|||            
  Fly   755 QQHSSLRRSSRGKT-GSCVSS-----AAAAQQQQHHQQQQHSSAAAAVQQQLL------------ 801

  Fly  2431 PVKACYSYMDL----ATAALNCIQSL----------------------------ATQAHQELSEG 2463
            |....|.|..:    ...|:...|.|                            ..|.||:....
  Fly   802 PPPGTYQYQQVGGNTVVVAVRHQQQLQQQQQQQQQLALHHQHQQQQHQQQQQQHQQQQHQQQQRA 866

  Fly  2464 GGVPPNGRALSSPPQPTMVHGVPVYNVARKEQKPSEQVEQ--KSKWPAAATDAQLI--------- 2517
            ..|.|.........||            :::|:|::|:.|  |....:||:||...         
  Fly   867 TLVQPGFLFSYRSNQP------------QQQQQPAQQIHQGPKVTHSSAASDALTYSLMAQQPPS 919

  Fly  2518 ------GQIMEMGFTRRTVELALKQLSLQAEI-------------MPTPEQIVQWILEHPDVCAN 2563
                  ||.:..|.....:.:....||...::             .|........:.....|.|:
  Fly   920 GPPHAGGQQITPGANSANLSIVAAALSAARDVGGGSDGGGSAGGATPATGASASSVGNTSAVGAS 984

  Fly  2564 TIEEDTLPLASSASSHDPEADSDNECPSSNSTTSSSTSSDTVEGQPMAVSGPAPPVKFESRKDFQ 2628
            :....:...|:|::|::..|......| ....||:.|:|.|..|   :.||.|..|..|| .|.:
  Fly   985 SSSNSSAGQAASSNSNNVTATGSGSAP-GGGPTSTGTTSGTQHG---SGSGAAAAVDSES-DDSE 1044

  Fly  2629 TADLYALYVRGLVRPGMTVRCCRDFEEIKQGDMGTVLIVDTEGLHDLNVQVDWRNHGSTYWVCFV 2693
            ...|.||                               ::..||                     
  Fly  1045 VGRLQAL-------------------------------LEARGL--------------------- 1057

  Fly  2694 HIELVEAAQTHHQPRPPPI--AVGARVRLRTSSLRYGMLCPLRLGRSQGSSAIGVVSSVRSKQLT 2756
                           ||.:  |:|.||   |..|.          |:.|:|     ||.::.||.
  Fly  1058 ---------------PPHLFGALGPRV---THILH----------RTIGNS-----SSSKANQLL 1089

  Fly  2757 VDFPDQPAWQGHINEVELVASQPTSATLPSLGDSCSQMPPSDLIEDWSRCIRSLTVSSNEAAAKH 2821
                     ||       :.|...|..|.:..:.|..:                 |..||     
  Fly  1090 ---------QG-------LQSHDESQQLQAAIEMCQML-----------------VMGNE----- 1116

  Fly  2822 LLNGSNQPWQSCSSGPCRHWIRLELHDRILVHSLTLKVSPEDHSHMPSLLE-IRVGDCVDSLKE- 2884
                     .:.:..|.:..:                         |:|:: :|:....|.:.. 
  Fly  1117 ---------DTLAGFPIKQVV-------------------------PALIQLLRMEHNFDIMNNA 1147

  Fly  2885 -----YTWIPVPAGASRVLLMQQVPTYYPWVEVVVKQCQNNGIQCKIHGIKFVGRRQQP------ 2938
                 |....:|..:..|  ::.||.:...::|:  ||.:...| .:..::.:.||...      
  Fly  1148 CRALAYMLEALPRSSGTV--VEAVPVFLEKLQVI--QCMDVAEQ-SLSALEILSRRHNKAILQAN 1207

  Fly  2939 ---------DLQHILANAQFLASEYSAGVGPGSTAGAGAVSTSHEEAAAAPEQDLPCTVMVWGLN 2994
                     |...|:|....||            ..|......|.|......:.||....:....
  Fly  1208 GISACLTYLDFFSIVAQRAALA------------IAANCCLNMHPEEFHFVAESLPLLARLLSQQ 1260

  Fly  2995 DKEQLGGLKGSKVK-VPTFSQTISRLRPI---HIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV 3055
            ||:.:..:..:..: |.:|.....||:.|   .:....:.|.:|            |...|..|.
  Fly  1261 DKKCIESVCSAFCRLVESFQHDGQRLQQIASPDLLKNCQQLLLV------------TPAILNTGT 1313

  Fly  3056 THNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVE 3120
            .             ..||:.:::.......||::|              |.:....||      .
  Fly  1314 F-------------TAVVRMLSLMCCSCPDLAISL--------------LRNDIAATL------L 1345

  Fly  3121 ALRAKKIRDVACGSSHSAAIS-SQGELY--TWGLGEYGRLGHGDNTTQLKPKL-------VTALA 3175
            .|........|..::|...|| |..|||  |..:||            |.|:|       |.:|.
  Fly  1346 YLLTGNAEPAAASATHVELISRSPSELYELTCLIGE------------LMPRLPLDGIFAVDSLL 1398

  Fly  3176 GRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGA 3240
            .|..:.             |:|...:.|.|      .||......|         |....||...
  Fly  1399 DRPTLN-------------TQDQVHWQWRD------DRGSWHNYST---------IDSRLIEAAN 1435

  Fly  3241 QFS---LALTRAGEVWTWGKGDYYRLGHGGDQHVRK----PQPIGGLRGRRVIHVAVGALHC--- 3295
            |.|   ::|:..|..:|   .|::.:     |.:.:    .:|:    .||:.|..|..:..   
  Fly  1436 QSSEDEISLSTFGRTYT---VDFHAM-----QQINEDTGTTRPV----QRRLNHNYVAPMSAGQD 1488

  Fly  3296 LAVTDAGQVYAWG--------------DNDHGQQGSGNTF----VNKKPALVIGLDAVFVNRVAC 3342
            |..|.||...|.|              :|::.....||:.    |.::|:    |||    |:||
  Fly  1489 LTTTSAGSAAAGGASTSAAAAAASSNNNNNNNNNPPGNSVNLNQVKRRPS----LDA----RIAC 1545

  Fly  3343 GSSHSIAWGLPNASSDEEKRGPVP-------------FSSTRDP------LGGSSLGIYEAETMQ 3388
                           .:|:||...             :||:..|      |......:|.| |.:
  Fly  1546 ---------------LKEERGLAADFIKHIFNVLYEVYSSSAGPNVRYKCLRALLRMVYYA-TPE 1594

  Fly  3389 TLKQEAK-PLNQSSLSESLALETPAARQAALGHVLR-AMSILQARQLIVAALTSHSKVNFKERGA 3451
            .|:|..| .|..|.::..|.           .:.|| .:..||..::::..|......:|:..|.
  Fly  1595 LLRQVLKYQLVSSHIAGMLG-----------SNDLRIVVGALQMAEILMRQLPDVFGTHFRREGV 1648

  Fly  3452 V------GGEEDHLIGGPIMGAPLQLAET---IAQGGG--EAPADATD-----------AGL--- 3491
            :      ....:.:...|   :|..|:.|   .|..||  .|||.|..           .||   
  Fly  1649 IYQFTQLTDPNNPICANP---SPKPLSATATPTANAGGSQSAPASANSLQVNPFFMDSAPGLSSA 1710

  Fly  3492 ---------QEHSPEA---AVDALTGGMSGGANTLPPLSAGPLSAFQSLTGSLSMSGSLSSSALP 3544
                     |.:|.::   |::|||....|          .|..|..:.:.|.:..|...||:.|
  Fly  1711 STTPSSSKHQSYSVKSFSHAMNALTASAKG----------TPSGALDATSSSTTAGGYNYSSSAP 1765

  Fly  3545 QHKHSRMSASAMSVMAATMTQQEEMLSHISHCHGLDDFGGLLGEPEAKSLVELLKLAVCGRCGPP 3609
                   |:|:.:..|..:|||                    |:|  :..|...:.||   ..||
  Fly  1766 -------SSSSGAPAAYFVTQQ--------------------GDP--RQYVHFQQPAV---PAPP 1798

  Fly  3610 STSQTIADTLISLGAGTPAVAAMLLETCITELEDLCTSRHCLGKLPKPVMQESSHPYVDNVNVTG 3674
            ...:.:...:...|...|.|                        :.:|..|:.:|..:.:.:   
  Fly  1799 PQQELLPSGVQQQGQQVPQV------------------------IYQPHHQQPAHLVLASTS--- 1836

  Fly  3675 VVRIPGAEMLRLEFDSQCST-----------EKRNDPLVIMDGTGRVLAMRSGREFAHWAPEIRV 3728
                .||........|..|.           :::..|.......||.   :|.:|.|..||....
  Fly  1837 ----SGAASSSSSSSSSSSASALQHKMTDMLKRKAPPKRKSQSGGRA---KSRQEDAAVAPAGSG 1894

  Fly  3729 LGDELRWKFSSDSSVNGWGWRFWVHAIMPAAT-LGESGSDRAVLSQPSMALVMSLLDSRLAPRQP 3792
            .|       .:..|.:|..    :|.::..|| ||.....|   |.|:.........||......
  Fly  1895 PG-------GAPPSSSGSA----MHELLSRATSLGSGNGGR---STPNSGGGSGSSKSRFNAGNS 1945

  Fly  3793 SVLLRLASALAACSQLGALTTAQRIWSLRKLHAVLLLEQAPRPQDPSLSTLLQPLIPELLRQYEY 3857
            |     .:..:..|.|.:|..|:  |. |:.|                            :.:.:
  Fly  1946 S-----NAGSSKSSFLASLNPAR--WG-RQTH----------------------------QNHHH 1974

  Fly  3858 EEPQVRGGIHLMHSDYFKTLAALACDMQLDAALPATSSSSSSSAA-----PGAISSTGDVHKWAW 3917
            ...|.:...|.:..|              .....:|.|.|.:..|     .||.|..|.::..| 
  Fly  1975 HHQQSQQQHHGLSKD--------------SGNSNSTGSGSGAGLAYTVSQHGAGSGAGGLNAAA- 2024

  Fly  3918 FKRYCIAVRVAQSLI-----------RRTELPRAFCLEVRKKFAEMLPSSSSNSNANPGCQSPGA 3971
                 :|..:::|:.           |..:..|...::..|::.|.....|..::.:...||..:
  Fly  2025 -----VAASISKSISHANLLAAANRERARQWVREQAVDFVKRYTEQEAKRSKAASESGATQSGSS 2084

  Fly  3972 SM-LNST--TSLSSSTVSNV-----SPPPGITGEQPDLHCHAHQLESTSTLLHEDHTLFQAPHDA 4028
            .: |:||  |.||::..:||     |....:.|...|  |....||..:.||..|.:.|:..|..
  Fly  2085 GVGLSSTGNTPLSTAGSTNVLERLSSILFKLNGSYHD--CLDALLELKTILLESDISPFEVNHSG 2147

  Fly  4029 QLLQWLNRRPDDWALSWGGASTIYGWGH-----------NHRGQLGGLE----GSRIKTPTPCEA 4078
            .:...||....:..|....| .:..:.|           .:.||:..:|    |:.:.....|  
  Fly  2148 LIKAMLNYMTSETGLVERDA-RLRSFMHVFAGLPLEPLLQNVGQMPTIEPIAFGAFVAKLNGC-- 2209

  Fly  4079 LSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQ-HVFVKKVAVN 4142
                 ..||   ||  |.|    |:.....|.|||........:....|..:|| |.....:...
  Fly  2210 -----VTQL---EQ--FPV----KVHDFPAGPGGRSNQSALRFFNTHQLKCNLQRHPQCNNLRQW 2260

  Fly  4143 SGGK---HCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSA---HSA 4201
            .||.   ..||:....|.|....|..|       :..|.....|.....:||.:....|   |..
  Fly  2261 KGGTVKIDPLAMVQAIERYLVVRGYGG-------IRADSDDDSEEDMDDNVAAVVLSQASFRHKL 2318

  Fly  4202 AITASGHVLTWGKGRYGRLGHGD---SEDQLRPKLVEALLG------------YRAID------I 4245
            ..|...|||.:....|..:....   ||........|.|||            ||.::      .
  Fly  2319 QFTIGDHVLPYNMTVYQAVKQFSPLVSEQPETDNESETLLGNASIWVQQHTIHYRPVEEEVTSGA 2383

  Fly  4246 ACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALT 4310
            |.|:..:.:.|                      |.|.:......|.|.      .|.:..|...:
  Fly  2384 AAGAASSSSSC----------------------SSGVQKQQSSSSSAS------SCVNATSSCSS 2420

  Fly  4311 KSGAVYTWGKGDFHRLGHGSVDHVRR-----------PKKVAALQ-------GKKIISIATGSL- 4356
            .||...  |.|...:..|.|.....|           |..::||:       ...::::...|| 
  Fly  2421 SSGVAS--GGGSLTKKAHKSSSKFMRKKTELWHEGIAPVVISALKPFLSSSLPADVVTVQDASLD 2483

  Fly  4357 ----------------HCVACSDSGEVYTWGD--------NDEGQLGDGTV-------------- 4383
                            |...|.....:....|        ....||.|..|              
  Fly  2484 ALCMLRVIHALNRHWDHLYGCVVRQNIIPQSDFIHPKIMAKANRQLQDPLVIMTGNLPQWLPQIG 2548

  Fly  4384 ------------------------TAIQR-----PRLVAA-----------------------LQ 4396
                                    .|:||     |.|.||                       .|
  Fly  2549 MACPFLFPFETRHLLFYATSFDRDRALQRLLDTTPDLNAAESSERVAPRLDRRKRAISRTEILKQ 2613

  Fly  4397 GKHIVKVTCGSAHTLALSTSQLSERLRPLPNPPLE-YDLV------RDLA--------------- 4439
            .:||::   ...|:.||...|....:.....|.|| |.||      .||.               
  Fly  2614 AEHILQ---DFGHSKALLEIQYENEVGTGLGPTLEFYALVSAELQRTDLGLWNGSDSYKQNSVTI 2675

  Fly  4440 PEALHARLILLHHFSELVCPCLAMLPISGDLSLGALKDVLV-----YNIKEAAFRKVIQ------ 4493
            .:.:.|...:||                       ::|.|.     .|....|...::.      
  Fly  2676 VDVVKANSAVLH-----------------------IEDALEATTTDQNTPAVAGASLVSSSTTTT 2717

  Fly  4494 TTMVRDKQHGPVIELNRIQVKRS--------RNRCNGLAGIDGMKSVFGQMVQKLPLLTQEALAL 4550
            ||..:..||.|....:|..|.||        .:..:..|..:.:..|..|...........|:..
  Fly  2718 TTTAQQHQHPPTRSSSRSHVLRSGAGQQPVEHSSSSAGANENALNMVIAQQFSDTNSANPAAIDN 2782

  Fly  4551 PHRVWKVKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLSS 4615
            |.....               :.::.:......|.|:   |.|........|....|.|....||
  Fly  2783 PSSTTT---------------ATTVVQHNTTTNNSSI---ITTTTTTSYVHAVHGLFPLPLGKSS 2829

  Fly  4616 VL-QMN----MFRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGE-------------------VL 4656
            .| ||.    .|:|||..|..||.....|.:..:.|.:|.|..|                   ::
  Fly  2830 KLPQMTKAKAKFKFLGKFMAKAVMDSRMLDLPFSLPFYRWLVSEEHSIGLADLMRVAPEVQNTLV 2894

  Fly  4657 RPTDLTEVDRDYVAGLLCIRNMDDDPKL---------FTALELPFSTSSARGHEVPLSTRYTHIS 4712
            |..||.. .|:|:.....|..|:...|:         ...|.|.|........|:....|.|.::
  Fly  2895 RLQDLVR-QREYILSDPNIDAMEKTEKIEQLDLDGCPIADLGLDFVLPGHANIELCRGGRDTPVT 2958

  Fly  4713 PRNRAEYVRL-ALGFRLHEFDEQVKAVRDGMSKVIPVPLLSLFSAAELQAMVCGSP--------D 4768
            ..|..:|:.| ...|.:....:|.:|:|:|...|.|:..|.:|...||:.:.|||.        :
  Fly  2959 VHNLHQYISLVTYWFLIEGVQKQFEALREGFDSVFPIQRLRMFYPEELECVFCGSGSEQQHSRWE 3023

  Fly  4769 IPLGLLKSVATYKGFDPSSALVTWFWEVMEEFTNQERSLFLRFVWGRTRLPRTIADFRG----RD 4829
            |.: |.:|..|..||...|..:.:.:|::..:...|:..||:||.|..|||  ...|:.    ..
  Fly  3024 IKM-LQESCRTDHGFHQDSQAIQYLYEILASYNRDEQRAFLQFVTGSPRLP--TGGFKALTPPLT 3085

  Fly  4830 FVLQVLEKNP-PDHFLPESYTCFFLLKMPRYSCKAVLLEKLKYA 4872
            .|.:.|::|. |:.:||...||...||:|.||.:.|:.:|||.|
  Fly  3086 IVRKTLDENQNPNDYLPSVMTCVNYLKLPDYSSREVMRQKLKVA 3129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HERC2NP_608388.2 RCC1 638..683 CDD:278826
RCC1 687..737 CDD:278826
RCC1 740..787 CDD:278826
RCC1 790..841 CDD:278826
RCC1_2 828..857 CDD:290274
Cyt-b5 1290..1363 CDD:278597
MIB_HERC2 1928..1987 CDD:284184 13/66 (20%)
UBA_HERC2 2515..2559 CDD:270585 6/71 (8%)
Cul7 2624..2699 CDD:288381 6/74 (8%)
APC10-HERC2 2762..2932 CDD:176485 23/176 (13%)
RCC1 3037..3088 CDD:278826 6/50 (12%)
RCC1 3091..3140 CDD:278826 6/48 (13%)
RCC1 3144..3194 CDD:278826 12/58 (21%)
RCC1 3197..3246 CDD:278826 11/51 (22%)
RCC1 3250..3298 CDD:278826 10/54 (19%)
RCC1 3302..3350 CDD:278826 14/65 (22%)
RCC1_2 4136..4166 CDD:290274 7/32 (22%)
RCC1 4154..4203 CDD:278826 10/51 (20%)
RCC1 4206..4257 CDD:278826 14/71 (20%)
RCC1 4260..4309 CDD:278826 6/48 (13%)
RCC1 4312..4360 CDD:278826 13/82 (16%)
RCC1 4364..4413 CDD:278826 16/122 (13%)
HECTc 4509..4880 CDD:238033 100/419 (24%)
HECTc 4553..4878 CDD:214523 91/367 (25%)
ctripNP_001189170.1 Extensin_2 <688..731 CDD:252669 10/46 (22%)
WWE 1409..1481 CDD:128922 19/98 (19%)
FAM199X <1985..2074 CDD:292442 17/108 (16%)
HECTc <2818..3138 CDD:294058 86/316 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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