Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_649347.1 | Gene: | Als2 / 40410 | FlyBaseID: | FBgn0037116 | Length: | 1486 | Species: | Drosophila melanogaster |
Alignment Length: | 953 | Identity: | 193/953 - (20%) |
---|---|---|---|
Similarity: | 328/953 - (34%) | Gaps: | 277/953 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 4039 DDWALSWGG-----ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4098
Fly 4099 PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVN-------SGGKHCLALTTEGE 4156
Fly 4157 V--YAWGEGEDGKLGHGN---RMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGR 4216
Fly 4217 YGRLGHGDSEDQLRPKLVEALLGYRAIDIACG-------------SGDAQTLCIT------DDDN 4262
Fly 4263 VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECG-SQFSVA-----LTKSG------AV 4315
Fly 4316 YTWGKGDFHRLGHGSVDHVRRPK--KVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQL 4378
Fly 4379 GDGTVT----AIQRPRLVAALQGKHIVKVTCGSAHTLALSTSQLSERLRPLPNPPLEYDLVRDLA 4439
Fly 4440 PEALHARLILLHHFSELVCPCLAMLPISGDLS--------------LGALKDVLVYNIKEAAFRK 4490
Fly 4491 VIQTTMVRDKQHG--PVIELNRIQVKRSRNRCNGLAGIDGMKSVF-GQMVQKLPLLTQEALALPH 4552
Fly 4553 RVWKVKFVGESVD--DCGGGYSESIAEMCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLSS 4615
Fly 4616 VL-QMN--------------MFRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPTDLTEVD 4665
Fly 4666 RDYVAGLLCIRNMDDDPKL--FTALELPFSTSSARGHEVPLSTRYTHISPRNR-----AEYVRLA 4723
Fly 4724 LGFRLHEFDEQVKAV-RDGMSKVIPVPLLSLFSAA-----------ELQAMVCGSPDIPLGLLKS 4776
Fly 4777 VATYKG-----------FDPSSALVTWFWEVMEEFTNQERSLFLRFV----------------WG 4814
Fly 4815 RTRLPRT---IADFRGRDF----VLQVLEKNPPDHFLPESYTC 4850 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | |||
RCC1 | 3091..3140 | CDD:278826 | |||
RCC1 | 3144..3194 | CDD:278826 | |||
RCC1 | 3197..3246 | CDD:278826 | |||
RCC1 | 3250..3298 | CDD:278826 | |||
RCC1 | 3302..3350 | CDD:278826 | |||
RCC1_2 | 4136..4166 | CDD:290274 | 8/38 (21%) | ||
RCC1 | 4154..4203 | CDD:278826 | 13/53 (25%) | ||
RCC1 | 4206..4257 | CDD:278826 | 14/63 (22%) | ||
RCC1 | 4260..4309 | CDD:278826 | 7/54 (13%) | ||
RCC1 | 4312..4360 | CDD:278826 | 16/55 (29%) | ||
RCC1 | 4364..4413 | CDD:278826 | 15/52 (29%) | ||
HECTc | 4509..4880 | CDD:238033 | 73/413 (18%) | ||
HECTc | 4553..4878 | CDD:214523 | 66/368 (18%) | ||
Als2 | NP_649347.1 | RCC1 | 258..304 | CDD:278826 | 15/47 (32%) |
RCC1_2 | 292..321 | CDD:290274 | 12/28 (43%) | ||
RCC1 | 308..361 | CDD:278826 | 15/52 (29%) | ||
PH-like | 616..715 | CDD:302622 | 18/101 (18%) | ||
VPS9 | 1373..1479 | CDD:280383 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |