Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_648452.1 | Gene: | Ube3a / 39266 | FlyBaseID: | FBgn0061469 | Length: | 973 | Species: | Drosophila melanogaster |
Alignment Length: | 1162 | Identity: | 241/1162 - (20%) |
---|---|---|---|
Similarity: | 383/1162 - (32%) | Gaps: | 374/1162 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 3887 DAALPATSSSSSSSAAPGAISSTGDVHKWAWFKRYCIAVRVAQSLIRRT-ELPRAFCLEVRKKFA 3950
Fly 3951 EMLPSSSSNSN-ANPGCQSPGASMLNSTTSLSSSTVSNVSPPPGITGEQPDLHCHAHQLESTSTL 4014
Fly 4015 LHEDHTL-FQAPHDAQLLQWLNRRPDDWALSWGGAST---------------------------- 4050
Fly 4051 ------------IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKL 4103
Fly 4104 FATG--YGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLAL------TTEGEVYAW 4160
Fly 4161 GEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4225
Fly 4226 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS--DGCKLPYKI 4288
Fly 4289 ESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV----------------DHVRR- 4336
Fly 4337 -PKKVAALQGKKIISIA----TGSLHC--------VACSDSGEVYTWGDNDEGQLGDGTVTA--- 4385
Fly 4386 -------------IQRPRLVAALQGKHIVKVTCGSA---------------HTLALSTSQLSERL 4422
Fly 4423 --------RPLPNPPLEYDLVRDLAPEALHARLILLHHFSELVCPCLAMLPISGD---------- 4469
Fly 4470 ----LSLGALKDVL-------VYNIKEAAFRKVIQTTMVRDKQHGPVIELNRIQVKRSRNRCNGL 4523
Fly 4524 AGIDGMKSVFGQMVQKLPLLTQEALALPHRVWK---VKFVGESVDDCGGGYSESIAEMCDELQNG 4585
Fly 4586 SVPLLINTPNGRGEAGANRDCFLLDPTLSSVLQMNMFRFLGVLMGIAVRTGSPLSINLAEPVWRQ 4650
Fly 4651 LTGEVLRPTDLTEVDRDYVAGLLCIRNMDDDPKLFTALE-----------------LPFSTSSAR 4698
Fly 4699 G----HEVPLSTRYTHISPRNRAEYVRLALGFRLH-EFDEQVKAVRDGMSKVI-PVPLLSLFSAA 4757
Fly 4758 ELQAMVCGSPDIPLGLLKSVATYK-GFDPSSALVTWFWEVMEEFTNQERSLFLRFVWGRTRLPRT 4821
Fly 4822 IADFRGRDFVLQVLEKNPPD-HFLPESYTCFFLLKMPRYSCKAVLLEKLKYAIHFCK 4877 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | |||
RCC1 | 3091..3140 | CDD:278826 | |||
RCC1 | 3144..3194 | CDD:278826 | |||
RCC1 | 3197..3246 | CDD:278826 | |||
RCC1 | 3250..3298 | CDD:278826 | |||
RCC1 | 3302..3350 | CDD:278826 | |||
RCC1_2 | 4136..4166 | CDD:290274 | 9/35 (26%) | ||
RCC1 | 4154..4203 | CDD:278826 | 8/48 (17%) | ||
RCC1 | 4206..4257 | CDD:278826 | 7/50 (14%) | ||
RCC1 | 4260..4309 | CDD:278826 | 9/50 (18%) | ||
RCC1 | 4312..4360 | CDD:278826 | 13/77 (17%) | ||
RCC1 | 4364..4413 | CDD:278826 | 8/79 (10%) | ||
HECTc | 4509..4880 | CDD:238033 | 94/397 (24%) | ||
HECTc | 4553..4878 | CDD:214523 | 86/353 (24%) | ||
Ube3a | NP_648452.1 | AZUL | 40..94 | CDD:293166 | 15/74 (20%) |
HECTc | 620..971 | CDD:238033 | 95/398 (24%) | ||
HECTc | 647..970 | CDD:214523 | 86/353 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45446967 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm3500 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.740 |