| Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001261249.1 | Gene: | Herc4 / 38151 | FlyBaseID: | FBgn0035207 | Length: | 1062 | Species: | Drosophila melanogaster |
| Alignment Length: | 1094 | Identity: | 263/1094 - (24%) |
|---|---|---|---|
| Similarity: | 415/1094 - (37%) | Gaps: | 322/1094 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 4051 IYGWGHNHRGQ--LGGLEGSRIKTP-----TPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4108
Fly 4109 GSGGRLGVGGSDSWAIPT---------LLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGE 4164
Fly 4165 DGKLGHG-NRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 4228
Fly 4229 LR---PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES 4290
Fly 4291 LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGS 4355
Fly 4356 LHCVACSDS-GEVYTWGDNDEGQLGDGTVTAIQRPRLV----------AALQG------------ 4397
Fly 4398 -----KHIVKVT------------------------------CGSA------------------- 4408
Fly 4409 -----------------------HTLALSTSQLS-ERLRPLPNPPLEY--------DLV------ 4435
Fly 4436 -RDLAPEALHARLILLH------HFSELVCP------------------CLAMLP---------- 4465
Fly 4466 --------ISGDLSLGAL-------KDVLVYNIKEAAFRKVIQT-TMVRDKQH------------ 4502
Fly 4503 -GPVIELNRIQVK-------RSRNRCNGLAGID-GMKSVFGQMVQKLPL---------------- 4542
Fly 4543 -----------------LTQEAL-ALPH-------RVWKVKFVGESVDDCGGGYSESIAEMCDEL 4582
Fly 4583 QNGSVPLLINTPNGRGEAGANRDCFLLDPTLSSVLQMNMFRFLGVLMGIAVRTGSPLSINLAEPV 4647
Fly 4648 WRQLTGEVLRPTDLTEV------DRDYVAGLLCIRNMDDDPKLFTALELPFSTS----------- 4695
Fly 4696 -SARGHEVPLSTRYTHISPRNRAEYVRLALGFRLHEFDEQVK----AVRDGMSKVIPVPLLSLFS 4755
Fly 4756 AAELQAMVCGSPDIPLGLLKSVATYK-GFDPSSALVTWFWEVMEEFTNQERSLFLRFVWGRTRLP 4819
Fly 4820 RTIADFRGRDFVLQVLEKNPPDHFLPESYTCFFLLKMPRYSCKAVLLEKLKYAI 4873 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
| RCC1 | 687..737 | CDD:278826 | |||
| RCC1 | 740..787 | CDD:278826 | |||
| RCC1 | 790..841 | CDD:278826 | |||
| RCC1_2 | 828..857 | CDD:290274 | |||
| Cyt-b5 | 1290..1363 | CDD:278597 | |||
| MIB_HERC2 | 1928..1987 | CDD:284184 | |||
| UBA_HERC2 | 2515..2559 | CDD:270585 | |||
| Cul7 | 2624..2699 | CDD:288381 | |||
| APC10-HERC2 | 2762..2932 | CDD:176485 | |||
| RCC1 | 3037..3088 | CDD:278826 | |||
| RCC1 | 3091..3140 | CDD:278826 | |||
| RCC1 | 3144..3194 | CDD:278826 | |||
| RCC1 | 3197..3246 | CDD:278826 | |||
| RCC1 | 3250..3298 | CDD:278826 | |||
| RCC1 | 3302..3350 | CDD:278826 | |||
| RCC1_2 | 4136..4166 | CDD:290274 | 9/29 (31%) | ||
| RCC1 | 4154..4203 | CDD:278826 | 19/49 (39%) | ||
| RCC1 | 4206..4257 | CDD:278826 | 16/53 (30%) | ||
| RCC1 | 4260..4309 | CDD:278826 | 17/48 (35%) | ||
| RCC1 | 4312..4360 | CDD:278826 | 17/47 (36%) | ||
| RCC1 | 4364..4413 | CDD:278826 | 20/148 (14%) | ||
| HECTc | 4509..4880 | CDD:238033 | 104/437 (24%) | ||
| HECTc | 4553..4878 | CDD:214523 | 88/344 (26%) | ||
| Herc4 | NP_001261249.1 | RCC1 | 6..55 | CDD:278826 | 18/52 (35%) |
| RCC1 | 59..110 | CDD:278826 | 14/58 (24%) | ||
| RCC1 | 114..163 | CDD:278826 | 19/48 (40%) | ||
| RCC1 | 167..218 | CDD:278826 | 16/52 (31%) | ||
| RCC1 | 221..270 | CDD:278826 | 17/48 (35%) | ||
| RCC1 | 273..322 | CDD:278826 | 17/48 (35%) | ||
| RCC1_2 | 309..339 | CDD:290274 | 10/29 (34%) | ||
| RCC1 | 327..390 | CDD:278826 | 13/62 (21%) | ||
| HECTc | 715..1060 | CDD:238033 | 93/371 (25%) | ||
| HECTc | 739..1059 | CDD:214523 | 88/347 (25%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C45446937 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 1 | 1.000 | - | - | otm3500 | |
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 5 | 4.750 | |||||