Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001286661.1 | Gene: | Magi / 37403 | FlyBaseID: | FBgn0034590 | Length: | 1202 | Species: | Drosophila melanogaster |
Alignment Length: | 1615 | Identity: | 272/1615 - (16%) |
---|---|---|---|
Similarity: | 467/1615 - (28%) | Gaps: | 693/1615 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 1101 TRLSPT--LGKQQEKEEEEREQQH---------QEPSTSPSLSLLHRFQRLLLSHIHQAQPEEET 1154
Fly 1155 TGAEALLLQYMHALIPACVATLQKAHELALQCREPGENSFGQMVGHLGRVLQADISDALLNELLV 1219
Fly 1220 GLLLLKRDRPQCLGGLRWARLFLPLLRVLDRLNRALGEGELR----------DGDDMG------- 1267
Fly 1268 ----------------WPGIICRGGPK-GGPPPADPETHYVRRADMENLLLDGSRCIILAGYVCD 1315
Fly 1316 LSGYNCESETLRSVLDSGLGKDLTAEMSSQ--VHRTAMEHILEHHKLGKYMVQASTEEKSSAPGP 1378
Fly 1379 SRLTHFSSECALAQLLGLVANLMCSGPALQPAELQCRQLDKSSLLSGGLQLLQPSNPFDEEKGEA 1443
Fly 1444 ------------RSSHSCHSTAGNTPTELPPPLPMQQQLAPGRGKSQLQLRADAFISGLAEARVS 1496
Fly 1497 EPPVAAW-LALTER---YCKAHNL---MWHQEFATEHPVQELERLLSAVLIRHQYLGGLVLNALE 1554
Fly 1555 TEVPPPRQLGEIIRLVHQAKWSVVRTR-------QQLNR--SYKEVCAPILERLRFLLYEVRPAI 1610
Fly 1611 SPQQRGLRRLPILQRPPRFKMLVRRLLQELRSSRQPAKPEDLLNASIQQEQEKKP----QSMPKQ 1671
Fly 1672 --ELEEQEEEETLLR-----RLNERQIHGEGELDPALMQDIVDFALQDSCDVETARRAMYCQMQR 1729
Fly 1730 YQLRLAGLQIVQQLLELHGLLDAAQYSLLNGFLGLHLKSTSSGG-----GSTGSGSSL------H 1783
Fly 1784 VLGQL--NMISAYQ------KARLLLAQ-----------------SRVLDWAVRELRRLVNQ--- 1820
Fly 1821 ----EQQGHARGKDSTNLGTYVLLKRLPRARFLLSVFGLLAKELGPNELGFLINSGLLGTVLGLL 1881
Fly 1882 AQTG-----GEGATGGQVHGELSI-----LYEDSVLKQKSS------KAQLSGPDLAKLMKIGTR 1930
Fly 1931 IVRGADWKWGDQDGNPPGEGRI--ISEVGEDGWVRVEWYTGATNSYRMGKEGQYDLQLAD----- 1988
Fly 1989 ----------SALNVASPTEPEREDVSGSEAS-----------------------PTSDSHPSKL 2020
Fly 2021 LRHCAAKLLQILAVGTGLHGAQLDKDALRGMTSMFRTIIYPKPSMSNISYALGWLNLGFIRAISG 2085
Fly 2086 DCPRLCLELSTPGWLSHYLSLLEQPA-GNEAGVYRQLHCLRLLQLILAQWGAEEEPRMPALVHQL 2149
Fly 2150 FATLGRIALHCPGDASLLPTAEGKARVLLTASHSGSVAEELVALLRRLHTLPSWNPVINSFLAQK 2214
Fly 2215 LCVAAELLAEQSHSTALDSEQVFVLGVLGAMGGHDLRPRVGLHCFHEGSHMVIASFTPKGRCLLA 2279
Fly 2280 PGG-------VGSGVGFVKVQLPAVMPHLDHTVFSLSRLPMNEMLLNAWT--VLLYGPAPELREL 2335
Fly 2336 PSSADGR---LDLALLRAQQ--LQMAVLHTNGVLYRHQVALRRILKQRAPGSIYASPDEPDRSDA 2395
Fly 2396 ESQQPGEQDQQLSSGSGQEPQLLIQCILLRATQASPVK-ACYSYMDLATAALNCIQSLATQAHQE 2459
Fly 2460 LSEG-----GGVPPNGRAL---SSPP---QPTMVHGVPVYNVARKEQKPSEQVEQ 2503 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | 14/74 (19%) | ||
MIB_HERC2 | 1928..1987 | CDD:284184 | 7/60 (12%) | ||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | |||
RCC1 | 3091..3140 | CDD:278826 | |||
RCC1 | 3144..3194 | CDD:278826 | |||
RCC1 | 3197..3246 | CDD:278826 | |||
RCC1 | 3250..3298 | CDD:278826 | |||
RCC1 | 3302..3350 | CDD:278826 | |||
RCC1_2 | 4136..4166 | CDD:290274 | |||
RCC1 | 4154..4203 | CDD:278826 | |||
RCC1 | 4206..4257 | CDD:278826 | |||
RCC1 | 4260..4309 | CDD:278826 | |||
RCC1 | 4312..4360 | CDD:278826 | |||
RCC1 | 4364..4413 | CDD:278826 | |||
HECTc | 4509..4880 | CDD:238033 | |||
HECTc | 4553..4878 | CDD:214523 | |||
Magi | NP_001286661.1 | WW | 294..323 | CDD:278809 | 12/67 (18%) |
WW | 342..372 | CDD:238122 | 6/46 (13%) | ||
PDZ | 443..534 | CDD:214570 | 20/128 (16%) | ||
DegQ | <455..534 | CDD:223343 | 18/88 (20%) | ||
PDZ_signaling | 606..668 | CDD:238492 | 13/65 (20%) | ||
PDZ | 925..1011 | CDD:214570 | 19/108 (18%) | ||
PDZ_signaling | 1029..1110 | CDD:238492 | 17/122 (14%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |