Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261061.1 | Gene: | Smurf / 36999 | FlyBaseID: | FBgn0029006 | Length: | 1061 | Species: | Drosophila melanogaster |
Alignment Length: | 990 | Identity: | 194/990 - (19%) |
---|---|---|---|
Similarity: | 312/990 - (31%) | Gaps: | 375/990 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 3955 SSSSNSN---ANPGCQSPGASMLNSTTSLSSSTVS------------NVSPPPGITGEQPDLHCH 4004
Fly 4005 AHQLESTSTLLHEDHTLFQAPHDAQLLQWLNRRPDDWALSWGGASTIYGWGHNHRGQLGGLEGSR 4069
Fly 4070 IKTPTPCEALSLLRPVQLAGGEQSLFAVTP-----------DGKLFAT------GYGSGGRLGVG 4117
Fly 4118 GSDSWAIPTLLGSLQ-HVFVKKVAVNSGGKHCLAL--------TTEGEVYAWGEGEDGKLGHGNR 4173
Fly 4174 MSYDRPKLVEHL-NGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEAL 4237
Fly 4238 LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECG 4302
Fly 4303 SQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVA--ALQGKKIISIATGSLHCVACSDSG 4365
Fly 4366 EVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTSQLSERLRPLPNPPL 4430
Fly 4431 EYDLVRDLAPEALHARLILLHHFSELVCPCLAMLPISGDLSLGALKDVLVYNIKEAAFRKVIQTT 4495
Fly 4496 MVRDKQHGPVIELNRIQVKRSRNRCNGLAGIDGMKSVFGQMVQKLPLLTQEALALPHRVWKVKFV 4560
Fly 4561 GESVDDCGGGYSESIAEMCDELQNGSVPLL-----------INTPNGRGEAGANRDCFLLDPTLS 4614
Fly 4615 SVLQMNMFRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPTDLTEVDRDYVAGLLCIRNMD 4679
Fly 4680 DDPKLFTALELPFST-SSARG----HEVPLSTRYTHISPRNRAEYVRLALGFR-LHEFDEQVKAV 4738
Fly 4739 RDGMSKVIPVPLLSLFSAAELQAMVCGSPDIPLGLLKSVATYKGFDPSSALVTWFWEVMEEFTNQ 4803
Fly 4804 ERSLFLRFVWGRTRLPRTIADFRG----------RDFVLQVLEKNPPDHFLPESYTCFFLLKMPR 4858
Fly 4859 YSCKAVLLEKLKYAI 4873 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | |||
RCC1 | 3091..3140 | CDD:278826 | |||
RCC1 | 3144..3194 | CDD:278826 | |||
RCC1 | 3197..3246 | CDD:278826 | |||
RCC1 | 3250..3298 | CDD:278826 | |||
RCC1 | 3302..3350 | CDD:278826 | |||
RCC1_2 | 4136..4166 | CDD:290274 | 8/37 (22%) | ||
RCC1 | 4154..4203 | CDD:278826 | 6/49 (12%) | ||
RCC1 | 4206..4257 | CDD:278826 | 6/50 (12%) | ||
RCC1 | 4260..4309 | CDD:278826 | 5/48 (10%) | ||
RCC1 | 4312..4360 | CDD:278826 | 12/49 (24%) | ||
RCC1 | 4364..4413 | CDD:278826 | 6/48 (13%) | ||
HECTc | 4509..4880 | CDD:238033 | 95/392 (24%) | ||
HECTc | 4553..4878 | CDD:214523 | 90/348 (26%) | ||
Smurf | NP_001261061.1 | C2_Smurf-like | 14..135 | CDD:176028 | |
WW | 169..198 | CDD:278809 | |||
WW | 514..546 | CDD:197736 | 10/75 (13%) | ||
WW | 562..594 | CDD:197736 | 12/61 (20%) | ||
HECTc | 702..1058 | CDD:238033 | 95/396 (24%) | ||
HECTc | 726..1058 | CDD:214523 | 90/352 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45446958 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |