| Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006256657.1 | Gene: | Hace1 / 361866 | RGDID: | 1306114 | Length: | 916 | Species: | Rattus norvegicus |
| Alignment Length: | 603 | Identity: | 138/603 - (22%) |
|---|---|---|---|
| Similarity: | 229/603 - (37%) | Gaps: | 154/603 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 4319 GKGDFHRLGHG---SVDHVRRPKKVAALQGKKIISIATGSLH--------CVACSDSGEVYTWGD 4372
Fly 4373 NDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTSQLSERLRPLPNPPLEYDLVRD 4437
Fly 4438 LAPEALHARLILLHHFSELV-CPCLAMLPISGDLSLGALKDVLVYNIKEAAFRKVIQTTMVR--- 4498
Fly 4499 -----DKQHGPVIELNRIQVKRS---RNRCNGLAGIDGMKSVFGQMVQKLPLLTQEALALPHRVW 4555
Fly 4556 KVKFVGESVDDCGGGYSESIAE-----MCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLSS 4615
Fly 4616 VL---QMNMFRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPTDLTEVDRDYVAGLLCIRN 4677
Fly 4678 MDDDPKLFTALELPFSTSS---ARGHEVPLSTRYTHI--SPRNRAEYVRLALGFRL-HEFDEQVK 4736
Fly 4737 AVRDGMSKVIPVPLLSLFSAAELQAMVCGSPDIPLG-LLKSVATYKGFDPSSALVTWFWEVMEEF 4800
Fly 4801 TNQERSLFLRFVWGRTRLPR-TIADFRG----RDFVLQVLEKNPPDHFLPESYTCFFLLKMPRYS 4860
Fly 4861 CKAVLLEKLKYAIHFCKS 4878 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
| RCC1 | 687..737 | CDD:278826 | |||
| RCC1 | 740..787 | CDD:278826 | |||
| RCC1 | 790..841 | CDD:278826 | |||
| RCC1_2 | 828..857 | CDD:290274 | |||
| Cyt-b5 | 1290..1363 | CDD:278597 | |||
| MIB_HERC2 | 1928..1987 | CDD:284184 | |||
| UBA_HERC2 | 2515..2559 | CDD:270585 | |||
| Cul7 | 2624..2699 | CDD:288381 | |||
| APC10-HERC2 | 2762..2932 | CDD:176485 | |||
| RCC1 | 3037..3088 | CDD:278826 | |||
| RCC1 | 3091..3140 | CDD:278826 | |||
| RCC1 | 3144..3194 | CDD:278826 | |||
| RCC1 | 3197..3246 | CDD:278826 | |||
| RCC1 | 3250..3298 | CDD:278826 | |||
| RCC1 | 3302..3350 | CDD:278826 | |||
| RCC1_2 | 4136..4166 | CDD:290274 | |||
| RCC1 | 4154..4203 | CDD:278826 | |||
| RCC1 | 4206..4257 | CDD:278826 | |||
| RCC1 | 4260..4309 | CDD:278826 | |||
| RCC1 | 4312..4360 | CDD:278826 | 13/51 (25%) | ||
| RCC1 | 4364..4413 | CDD:278826 | 6/48 (13%) | ||
| HECTc | 4509..4880 | CDD:238033 | 101/393 (26%) | ||
| HECTc | 4553..4878 | CDD:214523 | 94/344 (27%) | ||
| Hace1 | XP_006256657.1 | ANK repeat | 66..95 | CDD:293786 | |
| ANK | 66..93 | CDD:197603 | |||
| Ank_2 | 69..194 | CDD:289560 | |||
| ANK | 92..217 | CDD:238125 | |||
| ANK repeat | 97..128 | CDD:293786 | |||
| ANK repeat | 130..161 | CDD:293786 | |||
| Ank_2 | 135..222 | CDD:289560 | |||
| ANK repeat | 163..194 | CDD:293786 | |||
| ANK repeat | 196..221 | CDD:293786 | |||
| Ank_4 | 199..249 | CDD:290365 | |||
| HECTc | 561..910 | CDD:238033 | 100/390 (26%) | ||
| HECTc | 586..909 | CDD:214523 | 94/351 (27%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||