| Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001101802.1 | Gene: | Rcc1l / 360796 | RGDID: | 1307558 | Length: | 461 | Species: | Rattus norvegicus |
| Alignment Length: | 469 | Identity: | 128/469 - (27%) |
|---|---|---|---|
| Similarity: | 175/469 - (37%) | Gaps: | 133/469 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2970 STSHEEAAAAPEQDLPC------------TVMVWGLNDKEQLGGLKGSKVKVPTFSQTIS----- 3017
Fly 3018 -------RLRPIHIAGGSKSLFIVSQDGKV--YACGEG----------TNGRLGLGVTHN----- 3058
Fly 3059 ---------------VPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 3108
Fly 3109 NRTTLDKPRLVEALRAKKIRD-------VACGSSHSAAISSQGELYTWGLGEYGRLGHGD-NTTQ 3165
Fly 3166 LKPKLVTALAGRRVVQVA----CGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIE 3226
Fly 3227 R---LSGIG-VVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRK-----PQPIGGLR- 3281
Fly 3282 ---GRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNR---- 3339
Fly 3340 -----VACGSSHSI 3348 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
| RCC1 | 687..737 | CDD:278826 | |||
| RCC1 | 740..787 | CDD:278826 | |||
| RCC1 | 790..841 | CDD:278826 | |||
| RCC1_2 | 828..857 | CDD:290274 | |||
| Cyt-b5 | 1290..1363 | CDD:278597 | |||
| MIB_HERC2 | 1928..1987 | CDD:284184 | |||
| UBA_HERC2 | 2515..2559 | CDD:270585 | |||
| Cul7 | 2624..2699 | CDD:288381 | |||
| APC10-HERC2 | 2762..2932 | CDD:176485 | |||
| RCC1 | 3037..3088 | CDD:278826 | 18/82 (22%) | ||
| RCC1 | 3091..3140 | CDD:278826 | 14/55 (25%) | ||
| RCC1 | 3144..3194 | CDD:278826 | 22/54 (41%) | ||
| RCC1 | 3197..3246 | CDD:278826 | 17/52 (33%) | ||
| RCC1 | 3250..3298 | CDD:278826 | 14/56 (25%) | ||
| RCC1 | 3302..3350 | CDD:278826 | 15/56 (27%) | ||
| RCC1_2 | 4136..4166 | CDD:290274 | |||
| RCC1 | 4154..4203 | CDD:278826 | |||
| RCC1 | 4206..4257 | CDD:278826 | |||
| RCC1 | 4260..4309 | CDD:278826 | |||
| RCC1 | 4312..4360 | CDD:278826 | |||
| RCC1 | 4364..4413 | CDD:278826 | |||
| HECTc | 4509..4880 | CDD:238033 | |||
| HECTc | 4553..4878 | CDD:214523 | |||
| Rcc1l | NP_001101802.1 | RCC1 | 127..186 | CDD:278826 | 12/58 (21%) |
| RCC1_2 | 173..202 | CDD:290274 | 10/28 (36%) | ||
| RCC1 | 192..242 | CDD:278826 | 14/52 (27%) | ||
| RCC1_2 | 229..258 | CDD:290274 | 10/28 (36%) | ||
| RCC1 | 245..295 | CDD:278826 | 22/55 (40%) | ||
| RCC1 | 298..348 | CDD:278826 | 17/52 (33%) | ||
| RCC1_2 | 393..422 | CDD:290274 | 9/28 (32%) | ||
| RCC1 | 409..452 | CDD:278826 | 14/53 (26%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.820 | |||||