Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285655.1 | Gene: | CG9135 / 33850 | FlyBaseID: | FBgn0031769 | Length: | 487 | Species: | Drosophila melanogaster |
Alignment Length: | 405 | Identity: | 108/405 - (26%) |
---|---|---|---|
Similarity: | 176/405 - (43%) | Gaps: | 53/405 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 2980 PEQDLPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQ-TISRLRPIHIAGGSKS--LFIVSQDGKVY 3041
Fly 3042 ACGEGTNGRLGLGVTHNVPL---PHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103
Fly 3104 KLGHGN-RTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGD------ 3161
Fly 3162 NTTQL------KPKL------------VTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDF 3208
Fly 3209 GKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3271
Fly 3272 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN-DHGQQGSGNTFVNKK--PALVIGLD 3333
Fly 3334 AVFVNRVACGSSHSI 3348 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | 17/53 (32%) | ||
RCC1 | 3091..3140 | CDD:278826 | 14/49 (29%) | ||
RCC1 | 3144..3194 | CDD:278826 | 23/73 (32%) | ||
RCC1 | 3197..3246 | CDD:278826 | 17/50 (34%) | ||
RCC1 | 3250..3298 | CDD:278826 | 7/47 (15%) | ||
RCC1 | 3302..3350 | CDD:278826 | 15/50 (30%) | ||
RCC1_2 | 4136..4166 | CDD:290274 | |||
RCC1 | 4154..4203 | CDD:278826 | |||
RCC1 | 4206..4257 | CDD:278826 | |||
RCC1 | 4260..4309 | CDD:278826 | |||
RCC1 | 4312..4360 | CDD:278826 | |||
RCC1 | 4364..4413 | CDD:278826 | |||
HECTc | 4509..4880 | CDD:238033 | |||
HECTc | 4553..4878 | CDD:214523 | |||
CG9135 | NP_001285655.1 | RCC1 | 139..184 | CDD:278826 | 15/48 (31%) |
RCC1_2 | 171..200 | CDD:290274 | 11/30 (37%) | ||
RCC1 | 188..236 | CDD:278826 | 14/48 (29%) | ||
RCC1 | 239..312 | CDD:278826 | 23/74 (31%) | ||
RCC1 | 317..366 | CDD:278826 | 17/48 (35%) | ||
RCC1 | 414..465 | CDD:278826 | 16/52 (31%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |