Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285288.1 | Gene: | HUWE1 / 32510 | FlyBaseID: | FBgn0030674 | Length: | 5151 | Species: | Drosophila melanogaster |
Alignment Length: | 5939 | Identity: | 1052/5939 - (17%) |
---|---|---|---|
Similarity: | 1676/5939 - (28%) | Gaps: | 2381/5939 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 ASGGAGSSGQGAGSSQTASAAPVSAGVGVGGG----GGASGAAAGAGSAAGSGSGSGS----GSA 62
Fly 63 A-PPS---HSPDLYLRPLPFLDAKWLRADLIASLRNAADGAVLWNHLIQDCELVSSPTAPLLNAR 123
Fly 124 GQLSYLG---DDGKHYCG---------AQQLKCSCCQPEYCGPLSACNCDGCRPLDSDTAIKKLT 176
Fly 177 TQAAAQQAAHLSQATDMVLSGWLWSQPPSQQARLDCQRSMISELQELALRAAGNCLSAQHLRQQL 241
Fly 242 FIYERYFVALKRERERERKSTTSAQAVASVTTANTTIAATTANAAVESQPAEQQAEHGALG-LAR 305
Fly 306 VATHAALNFSFAFLRRAWRSGEDTEMCSELLSEALASLQELPEATLFEAAVVSSLWLEVMERSIK 370
Fly 371 FL----RLVAL-----GDPMGNRCTAPLNDRHTALCLLLELGVQKGTL--------AATLECVVL 418
Fly 419 LL------------LLW--EKDRAGNDNRDMPRKTGAPLQRILLRYQKIGATAKGGG-IAGGEPA 468
Fly 469 PVASATETFLRFLSLPKSSAAIVDLRRAAVVIISHLDRMVQPLMPRCLLRGGQATAASS------ 527
Fly 528 ----SSAPQQRIYAL-----GWPSLSKDQQGFSAEPTLSWSGESAGVPTLSCRFQIKQVACCETQ 583
Fly 584 MLILSQEGKLYTWRLAKPEAEPLPMEEVAHDV--FISI-------AGHCEGRHFLAIDSNHNAYS 639
Fly 640 WGTGEDHRLGHGDTHARAVP-TKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHG 703
Fly 704 NSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLV--FAWGDGDY--------GKLGNGN 758
Fly 759 CNGSLQPIL---------VESLPRVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGC 814
Fly 815 SVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPT 879
Fly 880 FPASGIACTSAQSLVWTQSSHQGVPRRAPFVVDLGEP-TFRLLDQLLGMCSSQDNRQTPNQESEC 943
Fly 944 IAVACLNLFRLQLLALIANGVEPRQVGLASGSRL---LCSLKTRILGLAGGSQVLRTIQVAAQQA 1005
Fly 1006 LQDGWSVLLPTAAERAQTLTSLLPSEPGQAS----------------SAG---------HRFMTD 1045
Fly 1046 LLVSSLMAEGGLESALQ---HAIRLESSS--------------------CSADCGDGVHLPL--- 1084
Fly 1085 LQLITRLLSNNAAL-SQTRLSPTLGKQQEKEEEEREQQHQEPSTSPSLSLLHRFQRLLLSHIHQA 1148
Fly 1149 QPEEETTGAEALLLQYMHALIPACVATLQKAHELALQCREP----GENSFGQMVGHLGRVLQADI 1209
Fly 1210 SDALLNELLVGLLLLKRDRPQCLGGLRWARLFLPLLRVLDRLNRALGEGELRDGDDMGWPGIICR 1274
Fly 1275 GGPKGGPPPADPETHYVRRADMENLLLDGSRCIILAGYVCDLSGYNCESETLRSVLDSGLGKDLT 1339
Fly 1340 AEMSSQVHRTAMEHILEHHKLGKYMVQASTEEKSSAPGPSRLTHFSSECALAQLLGLVANLMCSG 1404
Fly 1405 PALQPAELQCRQLDKSSLLSGGLQLLQPSNPFDEEKGEARSSHSCHSTAGNTPTELPPPLPMQQQ 1469
Fly 1470 LAPGRGKSQLQLRADAFISG-LAEARVSEPPVAAW---------LALTERYC-----KAHNLMWH 1519
Fly 1520 QEFATEHPVQELERLLSAVLIRHQYLGGLVLNALETEVPPPRQLGEIIRLVHQAKWSVVRTRQQL 1584
Fly 1585 NRSYKEVCAPILERLRFLLYEVRPAISPQQRGLRRLPILQRPPRFKMLVRRLLQELRSSRQPAKP 1649
Fly 1650 EDLLNASIQQEQEKKPQSMPKQE-LEEQEEEETLLRRLNERQIHGEGELDPALMQDIVDFALQDS 1713
Fly 1714 CDVETARRAMYCQMQRYQLRLAGLQIVQQLLELHGLLDAAQYSLLNGFLGLHLKSTSSG-----G 1773
Fly 1774 GSTGSGSSLHVLGQLNMISAYQKARLLLAQSRVLDWAVRELRRLVNQEQQGHARGKDSTNLGTYV 1838
Fly 1839 LLKRLPRARFLLSVFGLLAKELGPNELGFLINSGLLGTVLGLLAQTGGEGATGGQVHGELSILYE 1903
Fly 1904 DSVLKQKSSKAQLSGP-DLAKLMKIGTRIVRGADWKWGDQDGNPPGEGRIISEVGEDGWVRVEWY 1967
Fly 1968 TGATNSYRMGKEGQYDLQLADSALNVASPTEPEREDVSGSEASPTSDSHPSKLLRHCAAKLLQIL 2032
Fly 2033 AVGTGLHGAQLDKDALRGMTSMFRTIIYPKPSMSNISYALGWLNLGFIRAISGDCPRL---CLEL 2094
Fly 2095 STPGWLSHYLSLLEQPAGNEAGVYRQLHCLRL------LQLILAQWGAEEEPRMPALVHQLFATL 2153
Fly 2154 G---------RIALHCPGDASLLPTAEGKARVLLTASHSGSVA---EELVALLRRLHTLPSWNPV 2206
Fly 2207 INSFL-AQKLCVAAELLAEQSHSTALDSEQVFVLGVLG-----AMGG---HDLRPRVGLHCFHEG 2262
Fly 2263 SHMVIASFTPKGRCLLAPGGVGSGVGFVKVQLPAVM------PHLDHTVFSLSRLPMNEMLLNAW 2321
Fly 2322 TVLLYGPAPELRELPSSADGRLDLALLRAQQLQMAVLHTNGVLYRHQVALRRILKQRAPGSIY-A 2385
Fly 2386 SPDEPDRSDAESQQPGEQDQQLSSG--------SGQEPQLLIQCILL------RATQASPVKACY 2436
Fly 2437 SYMDLATAALNCIQSLATQAHQELSEGGGVP---------PNGRALSSPPQPTMV---------- 2482
Fly 2483 ---HGVP---------VYNVARKEQKPSEQVEQKSKWPAAATDA-----------------QLIG 2518
Fly 2519 QIMEMGFTRRTVEL---ALKQLSLQAEIMPTPEQIVQW--------------------ILEHPDV 2560
Fly 2561 CANTIEEDTLPLASSASSHDPEADSDNECPSSNSTTSSSTSSDTVEGQPMAVSGPAPPVKFESRK 2625
Fly 2626 DFQTADLYALYVRGLVRPGMTVRCCRDFEEIKQGDMGTVLIVDTEGLHDL-----NVQVDWRNHG 2685
Fly 2686 STYWVCFVHIELV----EAAQTHHQPRPPPIAVGARVRLRTSSLRYGMLCPLRLGRSQGSSAIGV 2746
Fly 2747 VSSV--RSKQLTVDFPDQPAWQGHINEVELVASQPTSATLPSLGDSCSQMPPSDLIEDWSRCIRS 2809
Fly 2810 --LTVSSNE------------AAAKHLLNGSNQPWQSCSSGPCRHWIRLELHDRILVHSLTLKVS 2860
Fly 2861 PEDHSHMPSLLEIRVGDCVDSLKEYTWIPVPAGASRVLLMQQVPTYYPWVEVVVKQCQNNGIQCK 2925
Fly 2926 IHGIKFVGRRQQPDLQHILANAQFLASEYSAGV-------GPGSTAGA----------------- 2966
Fly 2967 ---GAVSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQT----------ISR 3018
Fly 3019 LRPIHIAGGSKSLFIVSQDGKV----------------------YACGEGTNGRLGLGVTHNVPL 3061
Fly 3062 PHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLD------------ 3114
Fly 3115 ----KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALA 3175
Fly 3176 GRRVVQVACGSRDAQTLALTEDGAVFSWGDG-DFGKLGRGGSEGSDTPHEIERLSGIGVVQIECG 3239
Fly 3240 AQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 3304
Fly 3305 YAWGDNDHGQQGSGNT---FVNKKP---------ALVIGLDAVFVNRVACGSSHSIAWGLPNAS- 3356
Fly 3357 -----------SDEEKRGPVPFSSTRDPLGGSSLGIYEAETMQTLKQEAKPLNQSSLSESLALET 3410
Fly 3411 PAARQAA---LGHVLRAMSIL-QARQLIVAALTSHSKVNFKERGAVGGEEDHLIGGPIMGAPLQ- 3470
Fly 3471 -------LAETIAQGGGEA-----PADATDAGLQEHS-----------PEAAVDALTGGMSGGAN 3512
Fly 3513 TLPPLSAGPLSAFQS-------------------------------------LTGSLSMSGSLSS 3540
Fly 3541 S-------------------------ALPQHK-----------------HSRMSASAMSVMAATM 3563
Fly 3564 TQQEEMLSHIS-HCHGLDDFGGLL--GEPEAKSLVELLKLAVC--------GRCGP-PSTSQTIA 3616
Fly 3617 DTLISLGAGTPAVAAMLLETCITELEDLCTSRHCLGKLPKPVMQESSHPYVDNVNVTGVVRIPGA 3681
Fly 3682 EMLRLEFDSQCSTEKRNDPLVI--------MDGT-----------GRVLAMRSGREFAHWAPEIR 3727
Fly 3728 VLGDELRWKFSSDSSVNGWGWRFWVHAIMPAATLGESGS----DRAVLSQPSMALVMSLLDSRLA 3788
Fly 3789 PRQPSVLLRLASALAACSQLGALTTAQRIWSLR-KLHAVLLLEQAPRPQDPSL-----STLLQPL 3847
Fly 3848 IPELLRQYEYEEPQVRGGIHLMHSDYFKT----LAALACDMQLDAALPATSSSSSSSAAPGAISS 3908
Fly 3909 TGDVHKWAWFK------RYCIAVRVAQSLIRRTELPRAFCLEVRKKFAEMLPSSSSNSNANPGCQ 3967
Fly 3968 SPGASMLNSTTSLSS-------STV-----SNVSPP----PGITGEQPDLHCHAHQL-ESTSTLL 4015
Fly 4016 HEDHTLFQAPHD-AQLLQWL--------------------NRRPD-DWALSWGGASTIYGWGHNH 4058
Fly 4059 ----RGQLGG-------------------------LEGS-RIKTPTPCEA-------LSLL---- 4082
Fly 4083 -----------RPVQLAGGEQSLFAV-TPDGKLFATGYGSGGRLGVGGSDSWAIP---------- 4125
Fly 4126 ----------TLLGSLQHVF-----------------------------VKKVAVNSGGKHCLAL 4151
Fly 4152 TTEGEVY---------------------------AW------------GEGEDGKL--------- 4168
Fly 4169 ---GHGNRM--------SYDRPKLVEHL------------NGMSVADIACGSAH----------S 4200
Fly 4201 AAITASGHVL----------TWGKGRYGRLGHGDSEDQLRPKLVEAL------------------ 4237
Fly 4238 --LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL------GRGGSDGCKLPYKIESLAGL 4294
Fly 4295 -------------------------GVVKVECGSQFSVALTKSG-------------AVYTWGKG 4321
Fly 4322 DFHRLGHGSVDHVRRPKKVAALQ---GKKIIS---------------------------IATGSL 4356
Fly 4357 HCVACSDSGEVYTWGDNDEGQL---GDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLA----LS 4414
Fly 4415 TSQLS----------ERLRPLP--------------NPPLEYDLVRDLAPEALHARLILLH---- 4451
Fly 4452 HFSELVC-PCL-------------------AMLPISGDLSLGA---------------------- 4474
Fly 4475 -LKDVLVYNIKEAAF--------RKVIQTTMVRDKQHGPVIELNRIQVKRSRNRCNGLAGIDGMK 4530
Fly 4531 SVFGQMVQKLPLLTQE---ALALPH---------------------------------------- 4552
Fly 4553 ---RV--------WK----VKFVGESVDDCGGGYSESIAEMCDELQNGSVPLLINTPNGRGEAGA 4602
Fly 4603 NRDCFLLDPTL-SSVLQMNMFRFLGVLMGIAVRTGSPLSINLAEPVWRQLTGEVLRPTDLTEVDR 4666
Fly 4667 DYVAGLLCIRNMDDDPKLFTALELPFST-----SSARGHEVPLSTRYTHISPRNRAEYVRLALGF 4726
Fly 4727 RLH-EFDEQVKAVRDGMSKVIPVPLLSLFSAAELQAMVCGSPDIPLGLLKSVATYKGFDPSSALV 4790
Fly 4791 TWFWEVMEEFTNQERSLFLRFVWGRTRLP-RTIADFRGRDFV--LQVLEKNPPDHFLPESYTCFF 4852
Fly 4853 LLKMPRYSCKAVLLEKLKYAIHFC 4876 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | 6/45 (13%) |
RCC1 | 687..737 | CDD:278826 | 5/49 (10%) | ||
RCC1 | 740..787 | CDD:278826 | 12/65 (18%) | ||
RCC1 | 790..841 | CDD:278826 | 8/50 (16%) | ||
RCC1_2 | 828..857 | CDD:290274 | 2/28 (7%) | ||
Cyt-b5 | 1290..1363 | CDD:278597 | 8/72 (11%) | ||
MIB_HERC2 | 1928..1987 | CDD:284184 | 13/58 (22%) | ||
UBA_HERC2 | 2515..2559 | CDD:270585 | 8/66 (12%) | ||
Cul7 | 2624..2699 | CDD:288381 | 14/83 (17%) | ||
APC10-HERC2 | 2762..2932 | CDD:176485 | 22/183 (12%) | ||
RCC1 | 3037..3088 | CDD:278826 | 7/72 (10%) | ||
RCC1 | 3091..3140 | CDD:278826 | 11/64 (17%) | ||
RCC1 | 3144..3194 | CDD:278826 | 17/49 (35%) | ||
RCC1 | 3197..3246 | CDD:278826 | 12/49 (24%) | ||
RCC1 | 3250..3298 | CDD:278826 | 9/47 (19%) | ||
RCC1 | 3302..3350 | CDD:278826 | 12/59 (20%) | ||
RCC1_2 | 4136..4166 | CDD:290274 | 8/68 (12%) | ||
RCC1 | 4154..4203 | CDD:278826 | 17/129 (13%) | ||
RCC1 | 4206..4257 | CDD:278826 | 14/80 (18%) | ||
RCC1 | 4260..4309 | CDD:278826 | 10/79 (13%) | ||
RCC1 | 4312..4360 | CDD:278826 | 13/90 (14%) | ||
RCC1 | 4364..4413 | CDD:278826 | 12/55 (22%) | ||
HECTc | 4509..4880 | CDD:238033 | 95/436 (22%) | ||
HECTc | 4553..4878 | CDD:214523 | 87/346 (25%) | ||
HUWE1 | NP_001285288.1 | DUF908 | 90..326 | CDD:283630 | |
DUF913 | 621..989 | CDD:283642 | 105/625 (17%) | ||
UBA_like_SF | 1467..1506 | CDD:304366 | 10/113 (9%) | ||
WWE | 1756..1828 | CDD:128922 | 20/144 (14%) | ||
40S_SA_C | 3575..3651 | CDD:292740 | 19/100 (19%) | ||
DUF4414 | 3675..3779 | CDD:291075 | 21/105 (20%) | ||
HECTc | 4796..5149 | CDD:238033 | 87/359 (24%) | ||
HECTc | 4820..5148 | CDD:214523 | 84/335 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45446982 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |