| Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_572574.2 | Gene: | CG42797 / 31905 | FlyBaseID: | FBgn0261931 | Length: | 1426 | Species: | Drosophila melanogaster |
| Alignment Length: | 1674 | Identity: | 335/1674 - (20%) |
|---|---|---|---|
| Similarity: | 538/1674 - (32%) | Gaps: | 523/1674 - (31%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 3463 PIMGAPLQ-LAETIAQGGGEAPADATDAGLQEH----------------------SPEAAVDALT 3504
Fly 3505 GGMSGGANTLPPLSAGPLSAFQSLTGSLSMSGSLSSSALPQHKHSRMSASAMSVMAATMTQQEEM 3569
Fly 3570 LSHISHCHGLDDFGGLLGEPEAKSLVELLKLAVCGRCGPPSTSQTIADTLISLGAGTPAVAAMLL 3634
Fly 3635 ETCITELEDLCTSRHCLGKLPKPVMQESSHPYVDNVNVTGVVRIPGAEMLR---LEFDSQCSTEK 3696
Fly 3697 RNDPLVIMDGTGRVLAMRSGREFAHWAPEIRVLGDELRWKFSSDSSVNGWGWRFWV----HAIMP 3757
Fly 3758 AATLGESGSDRAVLSQPSMALVMSLLDSRLAPRQPSVLLRLASALAACSQLGALTTAQRIWSLRK 3822
Fly 3823 LHAVLLLEQAPRPQDPSLSTLLQPLIPE---LLRQYEYEEPQVRGGIHLMHSDYFKTLAALACDM 3884
Fly 3885 QLDAALPATSSSSSSS--AAP------------------GAISSTG-DVHKWAWFKRYCIAVRVA 3928
Fly 3929 QSLIRRTELPRAFCLEVRKKFAEML---PSSSSNSNANP--------------GCQSPGASMLNS 3976
Fly 3977 TTSLSSSTVSNV-----------SPPPGITGEQPDLHCHAHQLESTSTLLHEDHTLFQAPHDAQL 4030
Fly 4031 LQWLNRRPDDWALS--WGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQS 4093
Fly 4094 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVY 4158
Fly 4159 AWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADI----ACGSAHSAAITASGHVLTWGKGRY-G 4218
Fly 4219 RLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSW----GDGDYGKLGRGGS 4279
Fly 4280 DGCKLPYKIESLAGLGVVKVECGSQFSVALTKSG------------------AVYTWGKGDFHRL 4326
Fly 4327 GHGS----------------VDHVRRP----------KKVAALQGKKIISIATGSLHCVAC---- 4361
Fly 4362 -SDSGEVYTWGDNDEGQLGDGTVTAIQRPRL------VAALQGKH-------------IVKVTCG 4406
Fly 4407 SA---HTLALSTSQLSERLRPLPNPPLEYDLVRDLAPEALHARLILLHHFSELVCPCLA---MLP 4465
Fly 4466 ISGDLSLGA----LKDV-LVYNIKEAAFRK---VIQTTMVRDKQHGPVIELNRIQVKRSRN--RC 4520
Fly 4521 NGLAGIDG---------MKSVFGQMV-----------QKLPLLTQEALALPHRV---------WK 4556
Fly 4557 VKFVGESVDDCGGG-------------------YSESIAEMCDELQNGSVPLLINTPNGRGEAGA 4602
Fly 4603 NRDCF------LLDP------------------TLSSVLQ--MNMFRFLGVLMGIAVRTGSPLSI 4641
Fly 4642 NLAEPVWRQLTGEVLRPTDLTEVDRDYVAGLLCIRNMDDDPKLFTALELPFSTS-----SARGHE 4701
Fly 4702 VPLSTRYTHISPRNRAEYVRLALGFRLHE-FDEQVKAVRDGMSKVIPVPLLSLFSAAELQAMVCG 4765
Fly 4766 SPDIPLGLLKSVATYK-GFDPSSALVTWFWEVMEEFTNQERSLFLRFVWGRTRLP-RTIADFRG- 4827
Fly 4828 ---RDFVLQVLEKNPPDHFLPESYTCFFLLKMPRYSCKAVLLEKLKYAI 4873 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
| RCC1 | 687..737 | CDD:278826 | |||
| RCC1 | 740..787 | CDD:278826 | |||
| RCC1 | 790..841 | CDD:278826 | |||
| RCC1_2 | 828..857 | CDD:290274 | |||
| Cyt-b5 | 1290..1363 | CDD:278597 | |||
| MIB_HERC2 | 1928..1987 | CDD:284184 | |||
| UBA_HERC2 | 2515..2559 | CDD:270585 | |||
| Cul7 | 2624..2699 | CDD:288381 | |||
| APC10-HERC2 | 2762..2932 | CDD:176485 | |||
| RCC1 | 3037..3088 | CDD:278826 | |||
| RCC1 | 3091..3140 | CDD:278826 | |||
| RCC1 | 3144..3194 | CDD:278826 | |||
| RCC1 | 3197..3246 | CDD:278826 | |||
| RCC1 | 3250..3298 | CDD:278826 | |||
| RCC1 | 3302..3350 | CDD:278826 | |||
| RCC1_2 | 4136..4166 | CDD:290274 | 0/29 (0%) | ||
| RCC1 | 4154..4203 | CDD:278826 | 9/52 (17%) | ||
| RCC1 | 4206..4257 | CDD:278826 | 8/51 (16%) | ||
| RCC1 | 4260..4309 | CDD:278826 | 7/52 (13%) | ||
| RCC1 | 4312..4360 | CDD:278826 | 13/91 (14%) | ||
| RCC1 | 4364..4413 | CDD:278826 | 14/70 (20%) | ||
| HECTc | 4509..4880 | CDD:238033 | 104/453 (23%) | ||
| HECTc | 4553..4878 | CDD:214523 | 92/387 (24%) | ||
| CG42797 | NP_572574.2 | WW | 638..667 | CDD:278809 | 6/38 (16%) |
| HECTc | 1068..1424 | CDD:238033 | 88/355 (25%) | ||
| HECTc | 1092..1423 | CDD:214523 | 88/331 (27%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C45446990 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.740 | |||||