Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038938472.1 | Gene: | Ibtk / 315858 | RGDID: | 1311697 | Length: | 1352 | Species: | Rattus norvegicus |
Alignment Length: | 1441 | Identity: | 292/1441 - (20%) |
---|---|---|---|
Similarity: | 461/1441 - (31%) | Gaps: | 517/1441 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 2977 AAAPEQDLPCTVMVWGLNDKEQLGGL----KGSKVKVPTF-SQTISRLRPIHIAGGSKSLFIVSQ 3036
Fly 3037 DGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKK-------------VAVH--------- 3079
Fly 3080 ---SGGKHALALTLDGK--------------------------VFSWGEGEDGKLGHGNRTTLDK 3115
Fly 3116 PRLVEALRAKK--IRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRR 3178
Fly 3179 VVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGS-DTPHEIER--LSGIGVVQIECGA 3240
Fly 3241 QFSLALTRAGEVWTWG-KGDYYRLGH----GGDQHVRKPQPIGGLRGRRV----IHVAVGALHCL 3296
Fly 3297 AVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG------------------------LDAVFV 3337
Fly 3338 NRVACGSSHSIA-----WGLPNASSDEE---KRGPVPFSSTRDPLGGSSLGIYEAETMQTLKQEA 3394
Fly 3395 KP-LNQSSLSESLALETPAA----RQAALGHVLRAMS-----------ILQA---RQLIVAALTS 3440
Fly 3441 HSKVNFKERGAVGGEEDHL---------IGGPIM---------------------GAPLQLAETI 3475
Fly 3476 AQGGGEAPADATDAG-----LQEHSPEA-----------AVDALTGGMSGGANTLPPLSAGPLSA 3524
Fly 3525 FQSLTGSLSMSGSLSSSALPQHKHSRMSASAMSVMAATMTQQEEMLSHISHCHGLDDFGGLLGEP 3589
Fly 3590 EAKSLVELLKLAVCGRCGPPSTSQTIADTLISLGAGTPAVAAMLLETCITELEDLCTSRHCLGKL 3654
Fly 3655 PKPVMQESSHPYVDNV-------NVTGVVRIPGAEMLRLEFDSQCSTEKRNDPLVIMDGTGRVL- 3711
Fly 3712 ------------AMRS--GREF-AHWAPEIRVLGDELRWKFSSDSSVNGWGWRFWVHAIMPAATL 3761
Fly 3762 GESGSDRAVLSQPSMALVMSLLDSRLAPRQPSVLLRLASALAACSQLGALTTAQR--IWSLRKLH 3824
Fly 3825 AVLLLEQAPRPQDPSLSTLLQPLIPELLRQYEYEEPQVRG----GIHLMHSDYFKTLAALACDMQ 3885
Fly 3886 LDAAL------PATS-----------SSSSSSAAPGAISSTGDV-----HKWAWFKRYCIAVRVA 3928
Fly 3929 QSLIRRTELPRAFCLEVRKKFAEMLPSSSSNSNANPGCQS-PGASMLNST------------TSL 3980
Fly 3981 SSSTVSNVSPPPGITGEQPDLHCHAHQLESTSTLLHEDHTLFQAPHDAQLLQWLNRRPDDWALSW 4045
Fly 4046 GGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGS 4110
Fly 4111 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLG----HG 4171
Fly 4172 NRMSYDRPKLV 4182 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | 8/75 (11%) | ||
RCC1 | 3091..3140 | CDD:278826 | 13/76 (17%) | ||
RCC1 | 3144..3194 | CDD:278826 | 24/49 (49%) | ||
RCC1 | 3197..3246 | CDD:278826 | 13/51 (25%) | ||
RCC1 | 3250..3298 | CDD:278826 | 14/56 (25%) | ||
RCC1 | 3302..3350 | CDD:278826 | 14/76 (18%) | ||
RCC1_2 | 4136..4166 | CDD:290274 | 4/29 (14%) | ||
RCC1 | 4154..4203 | CDD:278826 | 8/33 (24%) | ||
RCC1 | 4206..4257 | CDD:278826 | |||
RCC1 | 4260..4309 | CDD:278826 | |||
RCC1 | 4312..4360 | CDD:278826 | |||
RCC1 | 4364..4413 | CDD:278826 | |||
HECTc | 4509..4880 | CDD:238033 | |||
HECTc | 4553..4878 | CDD:214523 | |||
Ibtk | XP_038938472.1 | Ank_2 | <45..116 | CDD:403870 | 14/96 (15%) |
ANK repeat | 51..82 | CDD:293786 | 7/56 (13%) | ||
ANK repeat | 84..116 | CDD:293786 | 6/31 (19%) | ||
ATS1 | 139..>341 | CDD:227511 | 67/206 (33%) | ||
RCC1 | 247..299 | CDD:395335 | 13/51 (25%) | ||
BTB1_POZ_IBtk | 547..652 | CDD:349610 | 18/118 (15%) | ||
BTB2_POZ_IBtk | 764..876 | CDD:349611 | 31/144 (22%) | ||
BACK_IBtk | 872..931 | CDD:350575 | 9/58 (16%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |