Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006246919.1 | Gene: | Zzef1 / 287476 | RGDID: | 1311189 | Length: | 2965 | Species: | Rattus norvegicus |
Alignment Length: | 2657 | Identity: | 518/2657 - (19%) |
---|---|---|---|
Similarity: | 848/2657 - (31%) | Gaps: | 1009/2657 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 2738 SQGSSAIGVVSSV--------RSKQLTVDFPDQPAWQGHINEVELVASQPTSATLPSL------- 2787
Fly 2788 -GDSCSQMPPSDLIEDWSRCIRSLTVSSNEAAAKHLLNG-SNQPWQSCSSGPCR-HWIRLELHDR 2849
Fly 2850 ILVHSLTLKVSPEDHSHMPSLLEIRVGDCVDSLKEYTWIPVPAGAS-RVLLMQQVPTYYPWVEVV 2913
Fly 2914 VKQCQNNGIQCKIHGIKFVGRRQQPD-------------------------------LQHILANA 2947
Fly 2948 Q-FLASEYSAGVGPGSTAGAGAVSTSHEE-----------AAAAPEQDLPCTVMVWGLNDKEQLG 3000
Fly 3001 GLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQL 3065
Fly 3066 PVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKL---GHGNRTTLDKPRLVEALRAKKI 3127
Fly 3128 R--------DVACG----------SSHSAAISSQGELY-TWGLGEYGRLGHGDNTTQLKPKLVTA 3173
Fly 3174 LAGRRVV--QVACGSRDAQTLALTEDGAV------FSWGDGDFGKLGRGGSEGSDTPHEIERLSG 3230
Fly 3231 IGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLR-GRRVIHVAVGALH 3294
Fly 3295 CLAVTDAGQVYAWGDNDHG-----------QQGSGNTFVNKKPAL-------VIGLD-AVFVN-- 3338
Fly 3339 -------RVAC-----------GSSHSIAWGLPNASSDEEK---RGPVPFSSTR----------D 3372
Fly 3373 PLGGSSLGIYEAETMQTLKQEAKPLNQSSLSESLALETPAARQAALGHVLRAMSIL------QAR 3431
Fly 3432 QLIVAALTSHSKVNFKERGAVGGEEDHLIGGPIMGAPLQLAETIAQGGGEAPADATDAGLQEHSP 3496
Fly 3497 EAAVDALTGGMSGGANTLPPLSAGP-----LSAFQSLTGSL------SMSGSLSSSALPQHKHSR 3550
Fly 3551 MSASAMSV----------MAATMTQQEEMLSHISHCHGLDDFGGLLGEPEAKSLVELLKLAVCGR 3605
Fly 3606 CGPPSTSQTIADTLISLGAGTPAVAAMLLETC---------------ITE-LEDLCTS-RHCLGK 3653
Fly 3654 L-------PKPVM-----QESSHPYVDNVNVTGVVRIPGAEMLRLEFDSQCSTEKRNDPLVIMDG 3706
Fly 3707 TGRVLAMRSGREFAHWAPEIRVL-GDELRWKFSSDSSVNGWGWRFWVHAI-MPAATLGESGSDRA 3769
Fly 3770 VLSQPSMALVMSLLDSRLAPRQPSVLLRLAS---ALAACSQLGA-LTTAQRIWSLRKLHAVL--- 3827
Fly 3828 ------------------------------------------LLE-------------------- 3830
Fly 3831 --QAPRPQDPSL-----STLLQPL----------IPELLRQYEYEEPQVRGGIHLMHSDYFKTLA 3878
Fly 3879 ALACDMQ---LDAALPATSSSSSSSAAPGAISSTGDVHKWAWFKRYCIAVRV------------- 3927
Fly 3928 --AQSLIRRTELPRAFCLEVRKKFAEMLP-----SSSSNSNANPGC--QSPGASMLNSTTSLSSS 3983
Fly 3984 TVSNVSPPPGITGEQPDLHCHAHQLESTSTLLHEDHTLFQAPHDAQLLQWLNRRPDDWALSWGGA 4048
Fly 4049 STIYGWGHNHRGQL-----GGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4108
Fly 4109 GSGGR-LGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCL----------ALTTEGEVYAWGE 4162
Fly 4163 GEDGKLGHGNRMSYDRPK------------LVEHLNGM-SVADIACGSAHSAAITASGHVLTWG- 4213
Fly 4214 -----------------------------------------------------------KGRYGR 4219
Fly 4220 LGHGDSEDQLRPKLVEA----LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD 4280
Fly 4281 GCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGH--GSVDHVRRPKKVAAL 4343
Fly 4344 QGKKIISIATGSLHCVACSD--------SGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHI 4400
Fly 4401 VKVTCGSAHTLALSTSQLSERLRPLPNPPLEYDLVRDLAPEALHARLILLHHFSELVCPCLAMLP 4465
Fly 4466 ISGDLSLGALKDVLVYNIKEAAFRKVIQTTMVRDKQHGPVIELNRIQVKRS----RNRCNGLAGI 4526
Fly 4527 DGMKSVFGQMVQKLPLL--------TQEALALPHRVWKVKFVGESVD-----------------D 4566
Fly 4567 CGGGYS-----------------ESIAEMCD---ELQNGSVPLLINTPNGRGEA-------GANR 4604
Fly 4605 DCFLLDPTLSSVL-QMNMFRFLGVLMGI--AVRTGS--PLSINLAE--PVWRQ------------ 4650
Fly 4651 ------LTGEVLRPTDLTEVDRDYVAGLLCIRNMDDDPKLFTALELPFSTSSARGHEVPLSTRYT 4709
Fly 4710 H---------ISPR-------NRAEYVRLALGFRLHEFDEQVKAVRDGMSKVIPVPL--LSLFSA 4756
Fly 4757 AELQAMVCGSPDIPLGLLKSVATYKGFDPSSALVTWFWEVMEEFTNQERSLFLRFVWGRTRLPRT 4821
Fly 4822 IADFR------GRD----------------FVLQVLEKNPPDHFLPESYTCFFLLKM 4856 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | 46/180 (26%) | ||
RCC1 | 3037..3088 | CDD:278826 | 13/50 (26%) | ||
RCC1 | 3091..3140 | CDD:278826 | 13/69 (19%) | ||
RCC1 | 3144..3194 | CDD:278826 | 9/52 (17%) | ||
RCC1 | 3197..3246 | CDD:278826 | 10/54 (19%) | ||
RCC1 | 3250..3298 | CDD:278826 | 10/48 (21%) | ||
RCC1 | 3302..3350 | CDD:278826 | 15/86 (17%) | ||
RCC1_2 | 4136..4166 | CDD:290274 | 5/39 (13%) | ||
RCC1 | 4154..4203 | CDD:278826 | 11/61 (18%) | ||
RCC1 | 4206..4257 | CDD:278826 | 13/114 (11%) | ||
RCC1 | 4260..4309 | CDD:278826 | 12/48 (25%) | ||
RCC1 | 4312..4360 | CDD:278826 | 8/49 (16%) | ||
RCC1 | 4364..4413 | CDD:278826 | 6/48 (13%) | ||
HECTc | 4509..4880 | CDD:238033 | 86/469 (18%) | ||
HECTc | 4553..4878 | CDD:214523 | 69/413 (17%) | ||
Zzef1 | XP_006246919.1 | EFh | <94..141 | CDD:238008 | |
APC10-ZZEF1 | 250..380 | CDD:176488 | 37/131 (28%) | ||
CUB | <1119..1189 | CDD:294042 | 23/69 (33%) | ||
ZZ_EF | 1779..1826 | CDD:239083 | 19/83 (23%) | ||
ZZ | 1828..1875 | CDD:239069 | 10/87 (11%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |