Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036271.1 | Gene: | SERGEF / 26297 | HGNCID: | 17499 | Length: | 458 | Species: | Homo sapiens |
Alignment Length: | 436 | Identity: | 127/436 - (29%) |
---|---|---|---|
Similarity: | 188/436 - (43%) | Gaps: | 67/436 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 4048 ASTIYGWGHNHRGQLGGLEGSRIKTPTP----CEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4108
Fly 4109 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLG--HG 4171
Fly 4172 NRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYG---RLGHGDSEDQL---- 4229
Fly 4230 RPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIES--LA 4292
Fly 4293 GLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI--------- 4348
Fly 4349 ---ISIATGSLHC------VACSD-------SGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQG 4397
Fly 4398 KHIVKVTCGSAHTLALSTSQLSERLRPLPNPPLEYDLVRDLAPEAL 4443 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | |||
RCC1 | 3091..3140 | CDD:278826 | |||
RCC1 | 3144..3194 | CDD:278826 | |||
RCC1 | 3197..3246 | CDD:278826 | |||
RCC1 | 3250..3298 | CDD:278826 | |||
RCC1 | 3302..3350 | CDD:278826 | |||
RCC1_2 | 4136..4166 | CDD:290274 | 8/29 (28%) | ||
RCC1 | 4154..4203 | CDD:278826 | 17/50 (34%) | ||
RCC1 | 4206..4257 | CDD:278826 | 16/57 (28%) | ||
RCC1 | 4260..4309 | CDD:278826 | 12/50 (24%) | ||
RCC1 | 4312..4360 | CDD:278826 | 13/65 (20%) | ||
RCC1 | 4364..4413 | CDD:278826 | 19/48 (40%) | ||
HECTc | 4509..4880 | CDD:238033 | |||
HECTc | 4553..4878 | CDD:214523 | |||
SERGEF | NP_036271.1 | RCC1 1 | 15..67 | 15/54 (28%) | |
RCC1 | 23..64 | CDD:278826 | 11/43 (26%) | ||
RCC1 2 | 68..119 | 16/52 (31%) | |||
RCC1 | 68..116 | CDD:278826 | 14/49 (29%) | ||
RCC1_2 | 103..132 | CDD:290274 | 8/30 (27%) | ||
RCC1 | 119..167 | CDD:278826 | 17/49 (35%) | ||
RCC1 3 | 120..171 | 19/52 (37%) | |||
RCC1 4 | 172..230 | 16/59 (27%) | |||
RCC1_2 | 219..243 | CDD:290274 | 8/25 (32%) | ||
RCC1 5 | 231..283 | 14/52 (27%) | |||
RCC1 | 231..279 | CDD:278826 | 11/48 (23%) | ||
RCC1 6 | 284..351 | 15/76 (20%) | |||
RCC1 | 284..348 | CDD:278826 | 15/73 (21%) | ||
RCC1 | 351..399 | CDD:278826 | 19/47 (40%) | ||
RCC1 7 | 352..402 | 20/51 (39%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 420..458 | 1/3 (33%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |