Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006513585.1 | Gene: | Eea1 / 216238 | MGIID: | 2442192 | Length: | 1458 | Species: | Mus musculus |
Alignment Length: | 933 | Identity: | 193/933 - (20%) |
---|---|---|---|
Similarity: | 335/933 - (35%) | Gaps: | 223/933 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 972 ASGSRLLCSLKTRILGLAGGSQVLRTIQVAAQQALQDGWSVLLPTAAERAQTLTSLLPSEPGQAS 1036
Fly 1037 SAGHRFMTDLLVSSLMAEGGLESALQHAIRLESSSCSADCGDGVHLPLLQLITRLLSNNAALSQT 1101
Fly 1102 R-LSPTLGKQQEKEEE---------EREQQHQEPSTSPSLSLLHRFQRLLLSHIHQAQPEEETTG 1156
Fly 1157 AEALLLQYMHALIPACVATLQKA-HELALQCREPGENSFGQMVGHLGRVLQADISDALLNELLVG 1220
Fly 1221 LLLLKRDRPQCLGGLRWARLFLPLLRVLDRLNRALGE------GELRDGDDMGWPGIICRGGPKG 1279
Fly 1280 GPPPADPETHYVRRADMENLLLDGSRCIILAGYVCDLSGYNCESETLRSVLDSGLGKDLTAEMSS 1344
Fly 1345 QVHRTAMEHILEHH-------------KLGKYMVQ-----ASTEEK-------SSAPGPSRLTHF 1384
Fly 1385 SSECALAQLLGLVANL-----------------------MCSGPALQPAEL-----------QCR 1415
Fly 1416 QLD---KSSLLSGGLQLL---QPSNPFDEEKGE--ARSSHSCHSTAGN----TPTELPPPLPMQQ 1468
Fly 1469 QLAP--GRGKSQLQLRADAFISGLAE-ARVSEPPVAAWLALTERYCK--AHNLMWHQEFATEHPV 1528
Fly 1529 QELERLLSAVLIRHQYLGGLVLNALETEVPPPRQLGEIIRLVHQAKWSVVRTRQQLNRSYKEVCA 1593
Fly 1594 PILERLRFLLYEVRPAISP--------QQRGLR----------RLPILQR-----PPRFKMLVRR 1635
Fly 1636 LL---QELRSSRQPAK---------PEDLL---------NASIQQEQEKK---PQSMPKQELEEQ 1676
Fly 1677 EEEETLLRRLNERQIHGEGEL--DPALMQDIVDFALQDSCDVETARRAMYCQMQRYQLRLAGLQ- 1738
Fly 1739 ----IVQQLLELHGLLDAAQYSL 1757 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | 16/85 (19%) | ||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | |||
RCC1 | 3091..3140 | CDD:278826 | |||
RCC1 | 3144..3194 | CDD:278826 | |||
RCC1 | 3197..3246 | CDD:278826 | |||
RCC1 | 3250..3298 | CDD:278826 | |||
RCC1 | 3302..3350 | CDD:278826 | |||
RCC1_2 | 4136..4166 | CDD:290274 | |||
RCC1 | 4154..4203 | CDD:278826 | |||
RCC1 | 4206..4257 | CDD:278826 | |||
RCC1 | 4260..4309 | CDD:278826 | |||
RCC1 | 4312..4360 | CDD:278826 | |||
RCC1 | 4364..4413 | CDD:278826 | |||
HECTc | 4509..4880 | CDD:238033 | |||
HECTc | 4553..4878 | CDD:214523 | |||
Eea1 | XP_006513585.1 | SMC_prok_B | <130..794 | CDD:274008 | 98/481 (20%) |
Smc | 504..1346 | CDD:224117 | 157/785 (20%) | ||
FYVE_EEA1 | 1394..1456 | CDD:277269 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |