Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006512697.1 | Gene: | Hace1 / 209462 | MGIID: | 2446110 | Length: | 921 | Species: | Mus musculus |
Alignment Length: | 644 | Identity: | 143/644 - (22%) |
---|---|---|---|
Similarity: | 231/644 - (35%) | Gaps: | 184/644 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 4267 GDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV 4331
Fly 4332 DHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQ 4396
Fly 4397 GKHIVKVTCGSAHTLALSTSQLSERLRPLPNPPLEYDLVRDLAPEALHARLILLHHFSELV-CPC 4460
Fly 4461 LAMLPISGDLSLGALKDVLVYNIKEAAFRKVIQTTMVR--------DKQHGPVIELNRIQVKRS- 4516
Fly 4517 --RNRCNGLAGIDGMKSVFGQMVQKLPLLTQEALALPHRVWKVKFVGESVDDCGGGYSESIAE-- 4577
Fly 4578 ---MCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLSSVL---QMNMFRFLGVLMGIAVRTG 4636
Fly 4637 SPLSINLAEPVWRQLTGEVLRPTDLTEVDRDYVAGLLCIRNMDDDPKLFTALELPFSTSS---AR 4698
Fly 4699 GHEVPLSTRYTHI--SPRNRAEYVRLALGFRL-HEFDEQVKAVRDGMSKVIPVPLLSLFSAAELQ 4760
Fly 4761 AMVCGSPDIPLG-LLKSVATYKGFDPSSALVTWFWEVMEEFTNQERSLFLRFVWGRTRLPR-TIA 4823
Fly 4824 DFRG----RDFVLQVLEKNPPDHFLPESYTCFFLLKMPRYSCKAVLLEKLKYAIHFCKS 4878 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | |||
RCC1 | 3091..3140 | CDD:278826 | |||
RCC1 | 3144..3194 | CDD:278826 | |||
RCC1 | 3197..3246 | CDD:278826 | |||
RCC1 | 3250..3298 | CDD:278826 | |||
RCC1 | 3302..3350 | CDD:278826 | |||
RCC1_2 | 4136..4166 | CDD:290274 | |||
RCC1 | 4154..4203 | CDD:278826 | |||
RCC1 | 4206..4257 | CDD:278826 | |||
RCC1 | 4260..4309 | CDD:278826 | 14/41 (34%) | ||
RCC1 | 4312..4360 | CDD:278826 | 4/47 (9%) | ||
RCC1 | 4364..4413 | CDD:278826 | 6/48 (13%) | ||
HECTc | 4509..4880 | CDD:238033 | 101/393 (26%) | ||
HECTc | 4553..4878 | CDD:214523 | 94/344 (27%) | ||
Hace1 | XP_006512697.1 | ANK repeat | 66..95 | CDD:293786 | |
Ank_2 | 69..194 | CDD:372319 | |||
ANK repeat | 97..128 | CDD:293786 | |||
ANK repeat | 130..161 | CDD:293786 | |||
ANK repeat | 163..194 | CDD:293786 | |||
Ank_2 | 168..263 | CDD:372319 | |||
ANK repeat | 196..233 | CDD:293786 | |||
HECTc | 566..915 | CDD:238033 | 100/390 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |