Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006532664.1 | Gene: | Zzef1 / 195018 | MGIID: | 2444286 | Length: | 2953 | Species: | Mus musculus |
Alignment Length: | 2641 | Identity: | 514/2641 - (19%) |
---|---|---|---|
Similarity: | 844/2641 - (31%) | Gaps: | 989/2641 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 2738 SQGSSAIGVVSSV--------RSKQLTVDFPDQPAWQGHINEVELVASQPTSATLPSL------- 2787
Fly 2788 -GDSCSQMPPSDLIEDWSRCIRSLTVSSNEAAAKHLLNG-SNQPWQSCSSGPCR-HWIRLELHDR 2849
Fly 2850 ILVHSLTLKVSPEDHSHMPSLLEIRVGDCVDSLKEYTWIPVPAGAS-RVLLMQQVPTYYPWVEVV 2913
Fly 2914 VKQCQNNGIQCKIHGIKFVGRRQQPD-------------------------------LQHILANA 2947
Fly 2948 Q-FLASEYSAGVGPGSTAGAGAVSTSHEE-----------AAAAPEQDLPCTVMVWGLNDKEQLG 3000
Fly 3001 GLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQL 3065
Fly 3066 PVLRQYVVKKVAVHSGGKHALA--------LTLDGK-----VFSWGEGEDGKLGHGNRTTLDKPR 3117
Fly 3118 LVEALRAKKIR--------DVACG----------SSHSAAISSQGELY-TWGLGEYGRLGHGDNT 3163
Fly 3164 TQLKPKLVTALAGRRVV--QVACGSRDAQTLALTEDGAV------FSWGDGDFGKLGRGGSEGSD 3220
Fly 3221 TPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLR-GRR 3284
Fly 3285 VIHVAVGALHCLAVTDAGQVYAWGDNDHG-----------QQGSGNTFVNKKPAL-------VIG 3331
Fly 3332 LDAVFV----------NRVAC-----------GSSHSIAWGLPNASSDEEKRGPVPFSSTRDPLG 3375
Fly 3376 GSSLGIYEAE------------------TMQTLKQEAKPLNQSSLSESLALETP--AARQAALGH 3420
Fly 3421 VLRAMSILQARQLIVAALTSHSKVNFKERGAVGGEEDHLIGGPIMGAPLQLAETIAQGGGEAPAD 3485
Fly 3486 ATDAGLQEHSPEAAVDALTGGMSGGANTLPPLSAGP-----LSAFQSLTGSL------SMSGSLS 3539
Fly 3540 SSALPQHKHSRMSASAMSV----------MAATMTQQEEMLSHISHCHGLDDFGGLLGEPEAKSL 3594
Fly 3595 VELLKLAVCGRCGPPSTSQTIADTLISLGAGTPAVAAMLLETC---------------ITE-LED 3643
Fly 3644 LCTS-RHCLGKL-------PKPVM-----QESSHPYVDNVNVTGVVRIPGAEMLRLEFDSQCSTE 3695
Fly 3696 KRNDPLVIMDGTGRVLAMRSGREFAHWAPEIRVL-GDELRWKFSSDSSVNGWGWRFWVHAI-MPA 3758
Fly 3759 ATLGESGSDRAVLSQPSMALVMSLLDSRLAPRQPSVLLRLAS---ALAACSQLGA--------LT 3812
Fly 3813 TA--QRIWSLRKLHAV---LLLEQA----PR---------PQDPSLSTLLQPLIPELLRQYEYEE 3859
Fly 3860 PQVRGGIHLMHSDYFKTLAALACDMQ---LDAALPATSSSSSSSAAPGAISSTGDVH-------- 3913
Fly 3914 ---KWAWFKRYCIAVRVAQSLIRRTELPRAFCLEVRKKFAEMLPSSSSNSNANPGCQSPGAS--- 3972
Fly 3973 ----------MLNSTTSLSSSTVSNVSPPPGITGEQPDLHCHAHQL---ESTSTLLHEDHTLFQA 4024
Fly 4025 PHDAQLLQWLNRRPDDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAG 4089
Fly 4090 GEQSLFAVTPD-------GKLFATGYGSGGRLGVGGSDSWAIPTLL---------------GSLQ 4132
Fly 4133 HVFVKKV---------------------AVNSGGKHCL----------ALTTEGE---VYAWGEG 4163
Fly 4164 EDGKLGHGNRMSY------------------DRP------------------------------- 4179
Fly 4180 KLVEHLNGMSVADIACGSAHSAAIT---------------------ASGHVLTWGKGRYGRLGHG 4223
Fly 4224 DSEDQLRPKLVEA----LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKL 4284
Fly 4285 PYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGH--GSVDHVRRPKKVAALQGKK 4347
Fly 4348 IISIATGSLHCVACSDSG---EVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAH 4409
Fly 4410 TLALSTSQLSERLRPLPNPPLEYDLVRDLAPEALHARLILLHHFSELVCPCLAMLPISGDLSLGA 4474
Fly 4475 LKDVLVYNIKEAAFRKVIQTTMVRDKQHGPVIELNRIQVKRSRNRCNGLAGIDGMKSVFGQMVQK 4539
Fly 4540 LPLL--------TQEALALPHRVWKVKFVGESVD-----DCGG-------------------GYS 4572
Fly 4573 ESIAE--MCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLSSVL----------------QM 4619
Fly 4620 NMFRFLGVLMGI--AVRTGS--PLSINLAE--PVWRQ------------------LTGEVLRPTD 4660
Fly 4661 LTEVDRDYVAGLLCIRNMDDDPKLFTALELPFSTSSARGHEVPLSTRYTH---------ISPR-- 4714
Fly 4715 -----NRAEYVRLALGFRLHEFDEQVKAVRDGMSKVIPVPL--LSLFSAAELQAMVCGSPDIPLG 4772
Fly 4773 LLKSVATYKGFDPSSALVTWFWEVMEEFTNQERSLFLRFVWGRTRLPRTIADFR------GRD-- 4829
Fly 4830 --------------FVLQVLEKNPPDHFLPESYTCFFLLKM 4856 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | 46/180 (26%) | ||
RCC1 | 3037..3088 | CDD:278826 | 13/58 (22%) | ||
RCC1 | 3091..3140 | CDD:278826 | 11/71 (15%) | ||
RCC1 | 3144..3194 | CDD:278826 | 10/52 (19%) | ||
RCC1 | 3197..3246 | CDD:278826 | 10/54 (19%) | ||
RCC1 | 3250..3298 | CDD:278826 | 10/48 (21%) | ||
RCC1 | 3302..3350 | CDD:278826 | 15/86 (17%) | ||
RCC1_2 | 4136..4166 | CDD:290274 | 10/63 (16%) | ||
RCC1 | 4154..4203 | CDD:278826 | 14/100 (14%) | ||
RCC1 | 4206..4257 | CDD:278826 | 12/54 (22%) | ||
RCC1 | 4260..4309 | CDD:278826 | 12/48 (25%) | ||
RCC1 | 4312..4360 | CDD:278826 | 8/49 (16%) | ||
RCC1 | 4364..4413 | CDD:278826 | 7/51 (14%) | ||
HECTc | 4509..4880 | CDD:238033 | 86/462 (19%) | ||
HECTc | 4553..4878 | CDD:214523 | 70/410 (17%) | ||
Zzef1 | XP_006532664.1 | EFh | <94..141 | CDD:238008 | |
APC10-ZZEF1 | 250..380 | CDD:176488 | 37/131 (28%) | ||
CUB | <1119..1189 | CDD:381774 | 23/69 (33%) | ||
ZZ_EF | 1779..1826 | CDD:239083 | 19/83 (23%) | ||
ZZ | 1828..1875 | CDD:239069 | 11/82 (13%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |