Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011236956.1 | Gene: | Trip12 / 14897 | MGIID: | 1309481 | Length: | 2074 | Species: | Mus musculus |
Alignment Length: | 2369 | Identity: | 472/2369 - (19%) |
---|---|---|---|
Similarity: | 731/2369 - (30%) | Gaps: | 766/2369 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 2960 PGSTAGAGAVSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLGGLK----------GSKVKVPTF-S 3013
Fly 3014 QTISRLRPIHIAG---GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKK 3075
Fly 3076 VAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI 3140
Fly 3141 SSQGELYTWGLGEYGRLGHGDNTTQLKPKLV--TALAGRRVVQVACGSRDAQTLALTEDGAVFSW 3203
Fly 3204 GDGDFGKLGRGGSEGSDTPHEIERLS------GIGVVQIECGA----QFSLALTRAGEVWTWGKG 3258
Fly 3259 DYYRLGHGGDQH-------VRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWG-------- 3308
Fly 3309 --DNDHGQQGSGNTFVNKK-PALVIGLDA--VFVNRVACGSSHSIAWGLPN--ASSDEEKRGPVP 3366
Fly 3367 FSSTRDPLGGSSLGIYEAETMQTLKQEAKPLNQSSLSESLALETPAARQAALGHVLRAMSILQAR 3431
Fly 3432 QLIVAALTS-HSKVNFKERGAV------GGEEDHLIG--GPIMGAPLQLAETIAQGGGEAPADAT 3487
Fly 3488 DAGLQ----EHSPEAAVDALTGGMSGGANTL---PPLSAGPL---------------SAFQSLT- 3529
Fly 3530 --GSLSMSGSLSSSALPQHKHSRMSASAMSVMAATMTQQEEMLSHISHCHGLDDFGGLLGEPEAK 3592
Fly 3593 SLVEL---------LKLAVCGRCG---PPSTSQTIADTLISLGAGTPAVAAMLLETCITELEDLC 3645
Fly 3646 TSRHCLGKL-------PKPVMQESSHPYVDNVNVTGVVRIP-------------------GAEML 3684
Fly 3685 RLEFDSQCSTEKRNDPLVIMDGTGR-------VLAMRSGREFAHWA----------PEIRVLGDE 3732
Fly 3733 LRWKFSSDSSVNG--WGWRFWVHAIMPAATLGESGSDRAVLSQPSMALVMSLLDSRLAPRQPSVL 3795
Fly 3796 LRLASALAACSQLG----ALTTAQRIW-----SLRKLH----AVLLLEQAPRPQDPSLSTLLQPL 3847
Fly 3848 IPELLR-QYEYEEPQVRGGIHLMHSDYFKTLAALACDMQLDAALPAT------------------ 3893
Fly 3894 ------SSSSSSSAAPGAISSTGDVHKWAWFKRYCIAVRVAQSLIRRTELPRAFCLEVRKK---- 3948
Fly 3949 FAEMLPSSSSNSNANPGCQSPGASMLNSTTSLSSSTVSNVSPPPGITGEQPDLHCHAHQLESTST 4013
Fly 4014 LLH-EDHTLFQAPHDAQLLQWLN---------RRP-----------DDWALS------------- 4044
Fly 4045 ------WGGAST--------------IYGWGH--------NHRGQLGG----------------- 4064
Fly 4065 -LEGSRIKTPTPCEALSLLR---------PVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGS 4119
Fly 4120 DSWAIPTLLGSLQHV-FVKKVAVNSGGKHCLALTTEGEVYAWGE-----------------GED- 4165
Fly 4166 -GK---LGHGNRMSYDRPKLVEHLNG---------MSVADIACGSAHSAAITASGHVLTWGKGRY 4217
Fly 4218 GRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 4282
Fly 4283 KLPYKIESLAGLGVVK---------------------------VECGSQFSVALTKSGAVYTWGK 4320
Fly 4321 GDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG--DGTV 4383
Fly 4384 TAIQRPRLVAALQGKHIVKVTCGSAHTLALSTSQLSER---------LRPLPNPPLEYDLVRDLA 4439
Fly 4440 PE-------ALHARLIL--LHHFSEL------VCPCLAMLP----ISGDLSLGA---LKDVLVY- 4481
Fly 4482 --NI------------------------------KEAAFRKVIQT------TMVRDKQHGPVIE- 4507
Fly 4508 ----LNRIQ-VKRSRNRCNGLAGIDGMKSV---------FGQMVQKLPLLTQEALALPHRVWKVK 4558
Fly 4559 FVGESVDDCGGGYSESIAEMCDELQNGSVPLLINTPNGRGEAGANRDCFLLDPTLSSVLQMNM-F 4622
Fly 4623 RFLGVLMGIAVR----TGSPLSINLAEPVWRQLTGEVLRPTDLTEVDRDYVAGLLCIRNM----- 4678
Fly 4679 ---DDDPKLFTALELPFSTSSARGHEV-PLSTRYT----------------HISPRNRAEYVRLA 4723
Fly 4724 LGFRLHE-FDEQVKAVRDGMSKVIPVPLLSLFSAAELQAMVCGSP----DIPLGLLKSVATYKGF 4783
Fly 4784 DPSSALVTWFWEVMEEFTNQERSLFLRFVWGRTRLPRTIADFRGRDFVLQVLEK-----NPPDHF 4843
Fly 4844 LPESYTCFFLLKMPRYSCKAVLLEKLKYA 4872 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | 5/50 (10%) | ||
RCC1 | 3091..3140 | CDD:278826 | 9/48 (19%) | ||
RCC1 | 3144..3194 | CDD:278826 | 13/51 (25%) | ||
RCC1 | 3197..3246 | CDD:278826 | 11/58 (19%) | ||
RCC1 | 3250..3298 | CDD:278826 | 8/54 (15%) | ||
RCC1 | 3302..3350 | CDD:278826 | 10/60 (17%) | ||
RCC1_2 | 4136..4166 | CDD:290274 | 10/48 (21%) | ||
RCC1 | 4154..4203 | CDD:278826 | 14/79 (18%) | ||
RCC1 | 4206..4257 | CDD:278826 | 8/50 (16%) | ||
RCC1 | 4260..4309 | CDD:278826 | 11/75 (15%) | ||
RCC1 | 4312..4360 | CDD:278826 | 10/47 (21%) | ||
RCC1 | 4364..4413 | CDD:278826 | 12/50 (24%) | ||
HECTc | 4509..4880 | CDD:238033 | 102/414 (25%) | ||
HECTc | 4553..4878 | CDD:214523 | 93/360 (26%) | ||
Trip12 | XP_011236956.1 | SRP1 | 489..>714 | CDD:227396 | 50/241 (21%) |
WWE | 814..876 | CDD:397111 | 17/96 (18%) | ||
HECTc | 1672..2072 | CDD:238033 | 102/418 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |