Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006532246.1 | Gene: | Nek8 / 140859 | MGIID: | 1890646 | Length: | 702 | Species: | Mus musculus |
Alignment Length: | 512 | Identity: | 141/512 - (27%) |
---|---|---|---|
Similarity: | 214/512 - (41%) | Gaps: | 100/512 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 2936 QQPDLQHILANAQFLASEYSAGVGPGSTAGAGAVSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLG 3000
Fly 3001 GLKGSKVKVPTFSQTISRLR-----PIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVP 3060
Fly 3061 LPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRT------TLDKP--- 3116
Fly 3117 -RLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVV 3180
Fly 3181 QVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLA 3245
Fly 3246 LTRAGEVWTWGKGDYYRLGHG----GDQHVRKPQ--------PIGG--LRGRRVIHVAVGALHCL 3296
Fly 3297 AVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA---------WG- 3351
Fly 3352 -----LPNASSDEEKRGPVPFSSTRDPLGGSSLGIYEAETMQTLKQE-AKPLNQSSL 3402 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | |||
Cul7 | 2624..2699 | CDD:288381 | |||
APC10-HERC2 | 2762..2932 | CDD:176485 | |||
RCC1 | 3037..3088 | CDD:278826 | 13/50 (26%) | ||
RCC1 | 3091..3140 | CDD:278826 | 17/58 (29%) | ||
RCC1 | 3144..3194 | CDD:278826 | 22/49 (45%) | ||
RCC1 | 3197..3246 | CDD:278826 | 17/48 (35%) | ||
RCC1 | 3250..3298 | CDD:278826 | 13/61 (21%) | ||
RCC1 | 3302..3350 | CDD:278826 | 18/56 (32%) | ||
RCC1_2 | 4136..4166 | CDD:290274 | |||
RCC1 | 4154..4203 | CDD:278826 | |||
RCC1 | 4206..4257 | CDD:278826 | |||
RCC1 | 4260..4309 | CDD:278826 | |||
RCC1 | 4312..4360 | CDD:278826 | |||
RCC1 | 4364..4413 | CDD:278826 | |||
HECTc | 4509..4880 | CDD:238033 | |||
HECTc | 4553..4878 | CDD:214523 | |||
Nek8 | XP_006532246.1 | STKc_Nek8 | 3..258 | CDD:270859 | 6/12 (50%) |
ATS1 | 318..663 | CDD:227511 | 111/364 (30%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |