Sequence 1: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_446073.2 | Gene: | Magi2 / 113970 | RGDID: | 621855 | Length: | 1277 | Species: | Rattus norvegicus |
Alignment Length: | 1094 | Identity: | 220/1094 - (20%) |
---|---|---|---|
Similarity: | 323/1094 - (29%) | Gaps: | 444/1094 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 2298 MPHLDHTVFSLSRLPMNEMLLNAWTVLLYGPAPELRELPSSADGRLDLALLRAQQLQMAVLHTNG 2362
Fly 2363 VLYRHQVALRRILKQRAPGSIYA--SPDEPDR----SDAESQQPGEQDQQLSSGSGQEPQLLI-- 2419
Fly 2420 -QCILLRATQASPVKACYSYMDLATAALNCIQSLATQAHQELSEGGGVPPNGRALSSPPQPTMVH 2483
Fly 2484 GVPVYN-----VARKEQKPSEQVEQK----SKWPAAATDAQLIG-----------QIMEMGFTRR 2528
Fly 2529 TVELALKQLSLQAEIM------------------PTPEQIVQWILEHPDV--CANTIEEDTLPLA 2573
Fly 2574 SSAS----SHDPEADSDNECPSSNST----------TSSSTSSDTV-----EGQPM-AVSGPA-- 2616
Fly 2617 -----PPV-----------KFESRKDFQTADLYALY--------VRGLVRPGMTVRCCR---DFE 2654
Fly 2655 E---------------IKQGD-------MGTVLIV---DTEG-LH--DLNVQVD-----WRNHGS 2686
Fly 2687 TYWVCFVHIELVEAAQTHHQPRPPPIAVGARVRLRTSSLRYGMLCPLRLGRSQGSSAIGVVSSVR 2751
Fly 2752 SKQLTVDFPDQPAWQGHINEVELVASQPTSATLPSLGDSCSQMPPSDLIEDWSRCIRSLTVSSNE 2816
Fly 2817 AAAKHLLNGSNQPWQSCS------------SGPCRHWIRLELHDRILVHSLTLKVSPEDHSHMPS 2869
Fly 2870 LLEIRVGDCVDSLKEYTWIPVPAGAS---RVLLMQQV--PTYYPWVEVVVKQCQNNGIQCKIHGI 2929
Fly 2930 KFVGRRQQPDLQHILANAQFLASEYSAGVGPGSTAGAGAVSTSHEEAAAAPEQDLPCTVMVWGLN 2994
Fly 2995 DKEQLGGLKGS-------------KVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEG 3046
Fly 3047 TNGRLGLGVTHNVPLP----HQLPVLRQYVVK-----------KVAVHSGGK------------- 3083
Fly 3084 ---HALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAA---ISS 3142
Fly 3143 QGE----LYTWGLG---EYGR---------------------LGHGDNTTQLKP 3168 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | 12/72 (17%) | ||
Cul7 | 2624..2699 | CDD:288381 | 28/118 (24%) | ||
APC10-HERC2 | 2762..2932 | CDD:176485 | 33/186 (18%) | ||
RCC1 | 3037..3088 | CDD:278826 | 12/81 (15%) | ||
RCC1 | 3091..3140 | CDD:278826 | 9/51 (18%) | ||
RCC1 | 3144..3194 | CDD:278826 | 13/53 (25%) | ||
RCC1 | 3197..3246 | CDD:278826 | |||
RCC1 | 3250..3298 | CDD:278826 | |||
RCC1 | 3302..3350 | CDD:278826 | |||
RCC1_2 | 4136..4166 | CDD:290274 | |||
RCC1 | 4154..4203 | CDD:278826 | |||
RCC1 | 4206..4257 | CDD:278826 | |||
RCC1 | 4260..4309 | CDD:278826 | |||
RCC1 | 4312..4360 | CDD:278826 | |||
RCC1 | 4364..4413 | CDD:278826 | |||
HECTc | 4509..4880 | CDD:238033 | |||
HECTc | 4553..4878 | CDD:214523 | |||
Magi2 | NP_446073.2 | PDZ_signaling | 22..96 | CDD:238492 | |
GuKc | 118..291 | CDD:214504 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 205..308 | ||||
Interaction with DDN. /evidence=ECO:0000250 | 302..381 | ||||
WW | 304..333 | CDD:395320 | |||
WW | 350..381 | CDD:197736 | |||
PDZ | 428..509 | CDD:214570 | 18/98 (18%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 556..575 | 3/21 (14%) | |||
PDZ | 602..683 | CDD:214570 | 15/84 (18%) | ||
MAGI_u5 | 687..758 | CDD:406953 | 17/74 (23%) | ||
PDZ | 775..861 | CDD:214570 | 21/101 (21%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 869..913 | 18/59 (31%) | |||
PDZ_signaling | 920..1007 | CDD:238492 | 22/114 (19%) | ||
PRK10263 | <1007..>1135 | CDD:236669 | 34/200 (17%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1011..1130 | 34/191 (18%) | |||
PDZ_signaling | 1140..1220 | CDD:238492 | 18/96 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |